RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ANKRD20A8PQ5CZ79 823 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ZNF473Q8WTR7 871 aaKnown RBP18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ADAM33Q9BZ11 813 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 RSPH14Q9UHP6 348 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ZMYND8Q9ULU4 1186 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ATXN2Q99700 1313 aaKnown RBP18.42■□□□□ 0.54
SFXN1-208ENST00000507823 A0A087WUV0 522 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-208ENST00000507823 SMIM23A6NLE4 172 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ZNF623O75123 536 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 CDH16O75309 829 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ALDH1A1P00352 501 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 SEC24CP53992 1094 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 KRT81Q14533 505 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 EFHC1Q5JVL4 640 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 CENPUQ71F23 418 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 TMEM86AQ8N2M4 240 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 PCDH19Q8TAB3 1148 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 CLEC4CQ8WTT0 213 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 P3H4Q92791 437 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 CCDC77Q9BR77 488 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 PPCSQ9HAB8 311 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 USP29Q9HBJ7 922 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 ACTL7BQ9Y614 415 aa18.42■□□□□ 0.54
SFXN1-208ENST00000507823 EBAG9O00559 213 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 GPR182O15218 404 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 CHN1P15882 459 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 PTPN1P18031 435 aaKnown RBP18.41■□□□□ 0.54
SFXN1-208ENST00000507823 ROR1Q01973 937 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 ADCY1Q08828 1119 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 ZC3H12AQ5D1E8 599 aaKnown RBP18.41■□□□□ 0.54
SFXN1-208ENST00000507823 SPATS2Q86XZ4 545 aaKnown RBP18.41■□□□□ 0.54
SFXN1-208ENST00000507823 MDM1Q8TC05 714 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 NT5C3BQ969T7 300 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 CFAP69A5D8W1 941 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 MEIS3P2A8K0S8 358 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 CACNB2Q08289 660 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-208ENST00000507823 CA9Q16790 459 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 WSCD1Q658N2 575 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 SRLQ86TD4 932 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 PIGZQ86VD9 579 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 FETUBQ9UGM5 382 aa18.41■□□□□ 0.54
SFXN1-208ENST00000507823 BCLAF3A2AJT9 711 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 E7EVH7 732 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 APOL1O14791 398 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 TSHRP16473 764 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 NPR3P17342 541 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 TFE3P19532 575 aaPredicted RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 L1CAMP32004 1257 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 RPL9P32969 192 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 RDXP35241 583 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 DSC3Q14574 896 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 NPNTQ6UXI9 565 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 ARHGEF2Q92974 986 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 MTMR10Q9NXD2 777 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 TSC2P49815 1807 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 DAB1O75553 588 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 THP07101 528 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 GCAP28676 217 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 MLH1P40692 756 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 MATKP42679 507 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 HIF1AQ16665 826 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 ANKRD22Q5VYY1 191 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 AGMOQ6ZNB7 445 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 FAM71DQ8N9W8 422 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 SENP8Q96LD8 212 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 AGO3Q9H9G7 860 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 PRDM16Q9HAZ2 1276 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 PPANQ9NQ55 473 aaKnown RBP18.4■□□□□ 0.54
SFXN1-208ENST00000507823 GPATCH2LQ9NWQ4 482 aa18.4■□□□□ 0.54
SFXN1-208ENST00000507823 LCP1P13796 627 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 LHX1P48742 406 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 FASTKD3Q14CZ7 662 aaKnown RBP18.39■□□□□ 0.54
SFXN1-208ENST00000507823 KIAA0319Q5VV43 1072 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 MAML1Q92585 1016 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 ZNF317Q96PQ6 595 aaPredicted RBP18.39■□□□□ 0.54
SFXN1-208ENST00000507823 GAD1Q99259 594 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 MIOSQ9NXC5 875 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 NAALADL1Q9UQQ1 740 aa18.39■□□□□ 0.54
SFXN1-208ENST00000507823 COL4A4P53420 1690 aaPredicted RBP18.39■□□□□ 0.54
SFXN1-208ENST00000507823 ATP2C2O75185 946 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 TOMM70O94826 608 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 MAGEA6P43360 314 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 RAB27AP51159 221 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 ARL4CP56559 192 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 PRKCZQ05513 592 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 TRIM32Q13049 653 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 FAM26DQ5JW98 314 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 VSTM1Q6UX27 236 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-208ENST00000507823 XPNPEP3Q9NQH7 507 aa18.39■□□□□ 0.53
SFXN1-208ENST00000507823 RCOR3Q9P2K3 495 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-208ENST00000507823 ARL5CA6NH57 179 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 ASGR1P07306 291 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms