RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 TDRPQ86YL5 185 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 FITM2Q8N6M3 262 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 PLD5Q8N7P1 536 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 GCOM2Q9BZD3 368 aaPredicted RBP22.95■■□□□ 1.26
SPCS3-203ENST00000507678 LMO2P25791 158 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 ELF1P32519 619 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 TFDP2Q14188 446 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 SEPT7Q16181 437 aaKnown RBP22.95■■□□□ 1.26
SPCS3-203ENST00000507678 EFHC2Q5JST6 749 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 KIF2BQ8N4N8 673 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 ECT2Q9H8V3 914 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 KLHL14Q9P2G3 628 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 PIN4Q9Y237 131 aaKnown RBP22.95■■□□□ 1.26
SPCS3-203ENST00000507678 NR2E3Q9Y5X4 410 aa22.95■■□□□ 1.26
SPCS3-203ENST00000507678 KBTBD13C9JR72 458 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 IL4RP24394 825 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 GBP2P32456 591 aaPredicted RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 SLC6A3Q01959 620 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 MGAT5Q09328 741 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 MAP7D3Q8IWC1 876 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 NETO2Q8NC67 525 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 DNAJB3Q8WWF6 145 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 N4BP2L2Q92802 583 aaPredicted RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 EMID1Q96A84 441 aaPredicted RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 FAXDC2Q96IV6 333 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 SNX27Q96L92 541 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 FRMD8P1Q9BZ68 369 aaPredicted RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 RBM47A0AV96 593 aaKnown RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 STRNO43815 780 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 ZNF200P98182 395 aaPredicted RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 MTFR1Q15390 333 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 SOWAHAQ2M3V2 549 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 ZNF410Q86VK4 478 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 NDRG1Q92597 394 aaKnown RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 ADAMTS10Q9H324 1103 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 DHX35Q9H5Z1 703 aaKnown RBP22.94■■□□□ 1.26
SPCS3-203ENST00000507678 PCDH18Q9HCL0 1135 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 SLC24A2Q9UI40 661 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 PHTF1Q9UMS5 762 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 TRIM33Q9UPN9 1127 aa22.94■■□□□ 1.26
SPCS3-203ENST00000507678 PLXNB2O15031 1838 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 APOL1O14791 398 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 ZBED1O96006 694 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 CYP2C9P11712 490 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 DCAF4L1Q3SXM0 396 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 PARP9Q8IXQ6 854 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 BEST2Q8NFU1 509 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 PCDH19Q8TAB3 1148 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 CCDC110Q8TBZ0 833 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 LRRC8CQ8TDW0 803 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 SYNJ2BP-COX16A0A087WUM0 186 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 NDC80O14777 642 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 DNAJC8O75937 253 aaPredicted RBP22.93■■□□□ 1.26
SPCS3-203ENST00000507678 APRTP07741 180 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 SMIM10L2AP0DMW4 78 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 SMIM10L2BP0DMW5 78 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 XRCC4Q13426 336 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 PQLC3Q8N755 202 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 DENND1AQ8TEH3 1009 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 KHSRPQ92945 711 aaKnown RBP eCLIP22.93■■□□□ 1.262e-6■■■□□ 15.6
SPCS3-203ENST00000507678 MIEF2Q96C03 454 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 RNF39Q9H2S5 420 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 COX16Q9P0S2 106 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 KIAA1257Q9ULG3 409 aa22.93■■□□□ 1.26
SPCS3-203ENST00000507678 ADRA1DP25100 572 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 HDAC4P56524 1084 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 KCNJ2P63252 427 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 FAM47CQ5HY64 1035 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 NOTUMQ6P988 496 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 SLC35F5Q8WV83 523 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 TMEM40Q8WWA1 233 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 L3MBTL3Q96JM7 780 aaPredicted RBP22.92■■□□□ 1.26
SPCS3-203ENST00000507678 ABHD16BQ9H3Z7 469 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 ACSS3Q9H6R3 686 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 MCM8Q9UJA3 840 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 PRPF4O43172 522 aaKnown RBP eCLIP22.92■■□□□ 1.26
SPCS3-203ENST00000507678 STIP1P31948 543 aaKnown RBP22.92■■□□□ 1.26
SPCS3-203ENST00000507678 KBTBD12Q3ZCT8 623 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 ECHDC2Q86YB7 292 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 CTAGE3PQ8IX95 158 aa22.92■■□□□ 1.26
SPCS3-203ENST00000507678 SMG5Q9UPR3 1016 aaKnown RBP22.92■■□□□ 1.26
SPCS3-203ENST00000507678 GPR32O75388 356 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 ENDOD1O94919 500 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 FGFR1P11362 822 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 GTF2A2P52657 109 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 HIC1Q14526 733 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 C9orf57Q5W0N0 161 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 TRIM56Q9BRZ2 755 aaKnown RBP22.91■■□□□ 1.26
SPCS3-203ENST00000507678 USP29Q9HBJ7 922 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 BAIAP2L1Q9UHR4 511 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 IKBKGQ9Y6K9 419 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 TCRBV9S1A1TA0A576 114 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 SPTLC1O15269 473 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 TYROBPO43914 113 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 FAM155BO75949 473 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 KLHL38Q2WGJ6 581 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 BOLA3Q53S33 107 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 SLC17A7Q9P2U7 560 aa22.91■■□□□ 1.26
SPCS3-203ENST00000507678 ZMYND8Q9ULU4 1186 aaPredicted RBP22.91■■□□□ 1.26
SPCS3-203ENST00000507678 CHUKO15111 745 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms