RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 IL27RAQ6UWB1 636 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 KIAA1324Q6UXG2 1013 aaKnown RBP14.8□□□□□ -0.04
DDR1-260ENST00000507533 DBX2Q6ZNG2 339 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 ZNF843Q8N446 348 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 CSGALNACT2Q8N6G5 542 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 LSM14AQ8ND56 463 aaKnown RBP14.8□□□□□ -0.04
DDR1-260ENST00000507533 CACTINQ8WUQ7 758 aaKnown RBP14.8□□□□□ -0.04
DDR1-260ENST00000507533 POMGNT1Q8WZA1 660 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 MRGPRX1Q96LB2 322 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 ZSCAN31Q96LW9 406 aaPredicted RBP14.8□□□□□ -0.04
DDR1-260ENST00000507533 SYT15Q9BQS2 421 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 PCDHGB2Q9Y5G2 931 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 RAD54BQ9Y620 910 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
DDR1-260ENST00000507533 TCHHQ07283 1943 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 PTPRBP23467 1997 aa14.8□□□□□ -0.04
DDR1-260ENST00000507533 TRIM66O15016 1216 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 KRT18P05783 430 aaKnown RBP14.79□□□□□ -0.04
DDR1-260ENST00000507533 KRT19P08727 400 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 NCAM1P13591 858 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 LMO2P25791 158 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 NOP14P78316 857 aaKnown RBP14.79□□□□□ -0.04
DDR1-260ENST00000507533 BNC1Q01954 994 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 MAPRE1Q15691 268 aaKnown RBP14.79□□□□□ -0.04
DDR1-260ENST00000507533 TDRD10Q5VZ19 366 aaKnown RBP14.79□□□□□ -0.04
DDR1-260ENST00000507533 GRAMD4Q6IC98 578 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 TMEM25Q86YD3 366 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 CFAP46Q8IYW2 2715 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 TOE1Q96GM8 510 aaKnown RBP14.79□□□□□ -0.04
DDR1-260ENST00000507533 FIZ1Q96SL8 496 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 GABRG3Q99928 467 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 GPR174Q9BXC1 333 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 IKZF4Q9H2S9 585 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 SPHK2Q9NRA0 654 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDR1-260ENST00000507533 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 NFE2L3Q9Y4A8 694 aa14.79□□□□□ -0.04
DDR1-260ENST00000507533 MYH11P35749 1972 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 E9PAM4 449 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 F8VP50 259 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 BCAT2O15382 392 aaPredicted RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 HLA-EP13747 358 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 ADSSP30520 456 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 RBP5P82980 135 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 SUZ12Q15022 739 aaKnown RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 POSTNQ15063 836 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 SMAD1Q15797 465 aaKnown RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 CCDC157Q569K6 752 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 LRRC69Q6ZNQ3 347 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 BBS7Q8IWZ6 715 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 CXorf38Q8TB03 319 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 SLITRK1Q96PX8 696 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 FAM213AQ9BRX8 229 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 DNAJC17Q9NVM6 304 aaKnown RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 WSB2Q9NYS7 404 aaPredicted RBP14.78□□□□□ -0.04
DDR1-260ENST00000507533 ITGA11Q9UKX5 1188 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 BTBD3Q9Y2F9 522 aa14.78□□□□□ -0.04
DDR1-260ENST00000507533 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 J3QKU1 62 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 PLK4O00444 970 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 CAPN9O14815 690 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 TNFSF14O43557 240 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 TBCAO75347 108 aaKnown RBP14.77□□□□□ -0.05
DDR1-260ENST00000507533 IFRD2Q12894 506 aaPredicted RBP14.77□□□□□ -0.05
DDR1-260ENST00000507533 DCAF12L1Q5VU92 463 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 DPH6Q7L8W6 267 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 CCDC83Q8IWF9 413 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 BRSK2Q8IWQ3 736 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 CADM4Q8NFZ8 388 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 SCFD1Q8WVM8 642 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 KBTBD7Q8WVZ9 684 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 PCED1BQ96HM7 432 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 ZFRQ96KR1 1074 aaKnown RBP14.77□□□□□ -0.05
DDR1-260ENST00000507533 ZNF462Q96JM2 2506 aa14.77□□□□□ -0.05
DDR1-260ENST00000507533 WASH3PC4AMC7 463 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 PRRT4C9JH25 899 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 COCHO43405 550 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 EIF2S3P41091 472 aaKnown RBP14.76□□□□□ -0.05
DDR1-260ENST00000507533 MDH1BQ5I0G3 518 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 DHRS13Q6UX07 377 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 LIMS2Q7Z4I7 341 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 METTL3Q86U44 580 aaKnown RBP14.76□□□□□ -0.05
DDR1-260ENST00000507533 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 ZSWIM2Q8NEG5 633 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 MYCBPAPQ8TBZ2 947 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 FCRL3Q96P31 734 aaPredicted RBP14.76□□□□□ -0.05
DDR1-260ENST00000507533 XPO6Q96QU8 1125 aaKnown RBP14.76□□□□□ -0.05
DDR1-260ENST00000507533 LLPHQ9BRT6 129 aaKnown RBP14.76□□□□□ -0.05
DDR1-260ENST00000507533 ST6GALNAC4Q9H4F1 302 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 ITM2CQ9NQX7 267 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 SIX4Q9UIU6 781 aa14.76□□□□□ -0.05
DDR1-260ENST00000507533 A0A1B0GVT2 93 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 METTL12A8MUP2 240 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms