RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SUPT20HQ8NEM7 779 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 SUN3Q8TAQ9 357 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 ATRIPQ8WXE1 791 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 FKBP10Q96AY3 582 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 R3HDM4Q96D70 268 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 AIFM2Q9BRQ8 373 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 EPS8L2Q9H6S3 715 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 MMRN2Q9H8L6 949 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 ITM2CQ9NQX7 267 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 TESQ9UGI8 421 aaKnown RBP4.05□□□□□ -1.76
LSM6-205ENST00000507449 CA14Q9ULX7 337 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 MAST3O60307 1309 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 SALL3Q9BXA9 1300 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 GRID2IPA4D2P6 1211 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 J3KTA2 159 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 SLC16A3O15427 465 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 DNPH1O43598 174 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 NARSO43776 548 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 CCNT2O60583 730 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 PPFIA4O75335 1185 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 ANXA6P08133 673 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 DHRS4L1P0CG22 281 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 GRM4Q14833 912 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 PTPRRQ15256 657 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 CYP1B1Q16678 543 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 TRIM71Q2Q1W2 868 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 LSM12Q3MHD2 195 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 PRR16Q569H4 304 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 LY6G5CQ5SRR4 150 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 Q6YL49 198 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 Q6ZPA2 131 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 CAND1Q86VP6 1230 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 RASGRP3Q8IV61 690 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 VRK3Q8IV63 474 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 LINC00476Q8WZB0 136 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 TFAP2BQ92481 460 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 CTHRC1Q96CG8 243 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 FBXL20Q96IG2 436 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 PGBD1Q96JS3 809 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 ZNF747Q9BV97 191 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 MRIQ9BWK5 157 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 INO80BQ9C086 356 aaPredicted RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 TP63Q9H3D4 680 aaPredicted RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 PRDM8Q9NQV8 689 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 KLC4Q9NSK0 619 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 TMOD4Q9NZQ9 345 aa4.04□□□□□ -1.76
LSM6-205ENST00000507449 SRP68Q9UHB9 627 aaKnown RBP4.04□□□□□ -1.76
LSM6-205ENST00000507449 M0R3H8 397 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 EXOC5O00471 708 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 FCHO1O14526 889 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 MPPED1O15442 326 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 SPRY2O43597 315 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 TAF5LO75529 589 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 VIPP01282 170 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 ELFN1P0C7U0 828 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 SRGAP2BP0DMP2 458 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 JUPP14923 745 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 YY1P25490 414 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 MCM5P33992 734 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PBX1P40424 430 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 FOLR3P41439 243 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PRKG1Q13976 671 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 CLCA4Q14CN2 919 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 ACOX1Q15067 660 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 TAF5Q15542 800 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 TIGD6Q17RP2 521 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 ZNF618Q5T7W0 954 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 GRHL2Q6ISB3 625 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 Q6ZNX1 250 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 GATAD2AQ86YP4 633 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 CPXCR1Q8N123 301 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 SLC44A3Q8N4M1 653 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 SCAMP5Q8TAC9 235 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 OTUD7AQ8TE49 926 aaPredicted RBP4.03□□□□□ -1.76
LSM6-205ENST00000507449 ABHD5Q8WTS1 349 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PPM1EQ8WY54 764 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 GRAMD1AQ96CP6 724 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 MCRS1Q96EZ8 462 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PBKQ96KB5 322 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 SCLT1Q96NL6 688 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PRR25Q96S07 402 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 PABPC3Q9H361 631 aaKnown RBP4.03□□□□□ -1.76
LSM6-205ENST00000507449 HELLSQ9NRZ9 838 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 EHD3Q9NZN3 535 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 GABRQQ9UN88 632 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 REXO2Q9Y3B8 237 aaKnown RBP4.03□□□□□ -1.76
LSM6-205ENST00000507449 EPN1Q9Y6I3 576 aaPredicted RBP4.03□□□□□ -1.76
LSM6-205ENST00000507449 COL4A3Q01955 1670 aa4.03□□□□□ -1.76
LSM6-205ENST00000507449 FAM90A18PA6NE21 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A16PA6NEW6 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A9PA6NNJ1 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A5PA8MXJ8 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 NPIPB8E9PQR5 432 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 MATN3O15232 486 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 ZSCAN9O15535 394 aaPredicted RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 PEX1O43933 1283 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 SNX2O60749 519 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 WDR47O94967 919 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms