RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 UGT2A3Q6UWM9 527 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 RNF111Q6ZNA4 994 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 TIFABQ6ZNK6 161 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 CCDC33Q8N5R6 958 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 FAM71DQ8N9W8 422 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 GSTCDQ8NEC7 633 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 XPNPEP1Q9NQW7 623 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 RBAKQ9NYW8 714 aaPredicted RBP18.45■□□□□ 0.54
NUP54-205ENST00000507257 PLK2Q9NYY3 685 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 PCDHA10Q9Y5I2 948 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 TTLL13PA6NNM8 815 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 NFIBO00712 420 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 FAM189A1O60320 539 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 OPHN1O60890 802 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 STAM2O75886 525 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 PSMA2P25787 234 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 POLR2BP30876 1174 aaKnown RBP18.44■□□□□ 0.54
NUP54-205ENST00000507257 SSTR3P32745 418 aaPredicted RBP18.44■□□□□ 0.54
NUP54-205ENST00000507257 RANBP1P43487 201 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 STX3Q13277 289 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 WDR75Q8IWA0 830 aaKnown RBP18.44■□□□□ 0.54
NUP54-205ENST00000507257 WDTC1Q8N5D0 677 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 ARFGAP1Q8N6T3 406 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 ATP6V0A1Q93050 837 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 RTP4Q96DX8 246 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 MECRQ9BV79 373 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 ZNF541Q9H0D2 1346 aa18.44■□□□□ 0.54
NUP54-205ENST00000507257 TMCC1O94876 653 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 ASS1P00966 412 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 IL1R2P27930 398 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 SERPINB9P50453 376 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 ALDH18A1P54886 795 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 NCOA4Q13772 614 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 CCNIQ14094 377 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 PGM5Q15124 567 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 NOMO1Q15155 1222 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 XRRA1Q6P2D8 792 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 MARVELD2Q8N4S9 558 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 RILPQ96NA2 401 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 RSAD1Q9HA92 442 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 POPDC2Q9HBU9 364 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 CHCHD3Q9NX63 227 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 CNTNAP2Q9UHC6 1331 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 DENRO43583 198 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 ZNF862O60290 1169 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 C6orf222P0C671 652 aaPredicted RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 CAP2P40123 477 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 COPAP53621 1224 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 ROR1Q01973 937 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 GRM1Q13255 1194 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 PDK3Q15120 406 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 PPM1NQ8N819 430 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 OCEL1Q9H607 264 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 NRDE2Q9H7Z3 1164 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 C10orf88Q9H8K7 445 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 XAB2Q9HCS7 855 aaKnown RBP18.43■□□□□ 0.54
NUP54-205ENST00000507257 PAK5Q9P286 719 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 ADAMTS6Q9UKP5 1117 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 MAD1L1Q9Y6D9 718 aa18.43■□□□□ 0.54
NUP54-205ENST00000507257 ENDOD1O94919 500 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 CNTFP26441 200 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 PRDX6P30041 224 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 RFC1P35251 1148 aaPredicted RBP18.42■□□□□ 0.54
NUP54-205ENST00000507257 AQP4P55087 323 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 MDH1BQ5I0G3 518 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 ARMC3Q5W041 872 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 TMEM126BQ8IUX1 230 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 PIWIL2Q8TC59 973 aaKnown RBP18.42■□□□□ 0.54
NUP54-205ENST00000507257 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
NUP54-205ENST00000507257 PRICKLE1Q96MT3 831 aaPredicted RBP18.42■□□□□ 0.54
NUP54-205ENST00000507257 CYP26B1Q9NR63 512 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 FBXO28Q9NVF7 368 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 LMCD1Q9NZU5 365 aa18.42■□□□□ 0.54
NUP54-205ENST00000507257 MAFGO15525 162 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 SMIM18P0DKX4 95 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 KRT3P12035 628 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 RPL5P46777 297 aaKnown RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 ACOT2P49753 483 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 UBAP2LQ14157 1087 aaKnown RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 MMEL1Q495T6 779 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 OGFRL1Q5TC84 451 aaPredicted RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 RFX6Q8HWS3 928 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 SPATA18Q8TC71 538 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 PYDC1Q8WXC3 89 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 LHX5Q9H2C1 402 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■■■ 120.6
NUP54-205ENST00000507257 ADGRA2Q96PE1 1338 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 ARHGAP42A6NI28 874 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 STRNO43815 780 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms