RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 COLGALT2Q8IYK4 626 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 EXOC6Q8TAG9 804 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 TCP11Q8WWU5 503 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 PGBD1Q96JS3 809 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 NLRP4Q96MN2 994 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 SPATA9Q9BWV2 254 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 IL25Q9H293 177 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 MARCH5Q9NX47 278 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 GIT1Q9Y2X7 761 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 COL4A3BPQ9Y5P4 624 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 MYH15Q9Y2K3 1946 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 F5P12259 2224 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 CEP295Q9C0D2 2601 aa7.44□□□□□ -1.22
NR1I3-224ENST00000507215 ANKRD11Q6UB99 2663 aaPredicted RBP7.44□□□□□ -1.22
NR1I3-224ENST00000507215 hCG_1642624A0A1W2PR95 340 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 C7orf72A4D263 438 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 POMCP01189 267 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 RXRAP19793 462 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 FGFR4P22455 802 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 TGM1P22735 817 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 LIMK1P53667 647 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 PSMC5P62195 406 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 AKAP17AQ02040 695 aaKnown RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 POU5F1BQ06416 359 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 GRIK3Q13003 919 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 MXD4Q14582 209 aaPredicted RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 CSRP2Q16527 193 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 PPM1LQ5SGD2 360 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 SLC35F1Q5T1Q4 408 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 JAKMIP3Q5VZ66 844 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 IL31Q6EBC2 164 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 FUT10Q6P4F1 479 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 MOXD1Q6UVY6 613 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 MIER3Q7Z3K6 550 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 KSR1Q8IVT5 923 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 NUP43Q8NFH3 380 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 SLC5A5Q92911 643 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 FGF13Q92913 245 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 FGF14Q92915 247 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 LENG9Q96B70 501 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 INTS4Q96HW7 963 aaKnown RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 SRPK1Q96SB4 655 aaKnown RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 DNAJC7Q99615 494 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 TRIM6Q9C030 488 aaPredicted RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 PIF1Q9H611 641 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 IFT122Q9HBG6 1241 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 TRPV5Q9NQA5 729 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 FBXW11Q9UKB1 542 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 PRG3Q9Y2Y8 225 aaPredicted RBP7.43□□□□□ -1.22
NR1I3-224ENST00000507215 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 PKD1L2Q7Z442 2459 aa7.43□□□□□ -1.22
NR1I3-224ENST00000507215 NPHP3-ACAD11A0A0J9YXS1 232 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 ARL5CA6NH57 179 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 AGRPO00253 132 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 MSH4O15457 936 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 PAPSS2O95340 614 aaPredicted RBP7.42□□□□□ -1.22
NR1I3-224ENST00000507215 FAM153BP0C7A2 387 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 PNLIPP16233 465 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 PAMP19021 973 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 L1CAMP32004 1257 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 TFDP1Q14186 410 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 KRT32Q14532 448 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 MLANAQ16655 118 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 Q4G0T1 1027 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 PARM1Q6UWI2 310 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 TPRG1Q6ZUI0 275 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 OTUD6AQ7L8S5 288 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 PALB2Q86YC2 1186 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 ELSPBP1Q96BH3 223 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
NR1I3-224ENST00000507215 CCDC136Q96JN2 1154 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 CEP89Q96ST8 783 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
NR1I3-224ENST00000507215 SH3GLB2Q9NR46 395 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
NR1I3-224ENST00000507215 TDRD15B5MCY1 1934 aaKnown RBP7.42□□□□□ -1.22
NR1I3-224ENST00000507215 CYP3A7-CYP3A51PA0A087WV96 503 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 TMEM8BA6NDV4 472 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 GOLGA8AA7E2F4 631 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 GOLGA8BA8MQT2 603 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 ZNF197O14709 1029 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 SLC27A2O14975 620 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 PRODHO43272 600 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 B4GALT3O60512 393 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 TADA2AO75478 443 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 CSDE1O75534 798 aaKnown RBP7.41□□□□□ -1.22
NR1I3-224ENST00000507215 PSMD10O75832 226 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 C8AP07357 584 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 LCP1P13796 627 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
NR1I3-224ENST00000507215 CYP3A7P24462 503 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 TACR1P25103 407 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 HOXA6P31267 233 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 HOXA11P31270 313 aaPredicted RBP7.41□□□□□ -1.22
NR1I3-224ENST00000507215 MLH1P40692 756 aa7.41□□□□□ -1.22
NR1I3-224ENST00000507215 QARSP47897 775 aaKnown RBP7.41□□□□□ -1.22
NR1I3-224ENST00000507215 SSRP1Q08945 709 aaKnown RBP7.41□□□□□ -1.22
NR1I3-224ENST00000507215 SPIRE1Q08AE8 756 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms