RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ZBTB21Q9ULJ3 1066 aa17.77■□□□□ 0.43
SQSTM1-211ENST00000506690 POMPQ9Y244 141 aa17.77■□□□□ 0.43
SQSTM1-211ENST00000506690 hCG_2014768A0A024R1R8 64 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 BIRC5O15392 142 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 PDE5AO76074 875 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 C4BPAP04003 597 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 BPGMP07738 259 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 CLCN2P51788 898 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 COPAP53621 1224 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 CBLBQ13191 982 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DMP1Q13316 513 aaPredicted RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DPYSL3Q14195 570 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 LMBRD2Q68DH5 695 aaPredicted RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 KBTBD6Q86V97 674 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 APBB2Q92870 758 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 APOBEC3GQ9HC16 384 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 BLOC1S6Q9UL45 172 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 AGTPBP1Q9UPW5 1226 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 TTLL3Q9Y4R7 772 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 KLHL2O95198 593 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 CALB1P05937 261 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 GARTP22102 1010 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 L1CAMP32004 1257 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 EMP3P54852 163 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 CYLC2Q14093 348 aaPredicted RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 TAZQ16635 292 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 UGCGQ16739 394 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DNAJC24Q6P3W2 148 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DCUN1D2Q6PH85 259 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 CCDC33Q8N5R6 958 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 ZFP28Q8NHY6 868 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 ZFRQ96KR1 1074 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 NTPCRQ9BSD7 190 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DDX18Q9NVP1 670 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 THAP1Q9NVV9 213 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 UBAP1Q9NZ09 502 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 DMTF1Q9Y222 760 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 INPP5FQ9Y2H2 1132 aa17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 MRPL11Q9Y3B7 192 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-211ENST00000506690 VNN1O95497 513 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 PROCP04070 461 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 SERPINB6P35237 376 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 STX3Q13277 289 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 ARCQ7LC44 396 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 C4orf19Q8IY42 314 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 POU5F2Q8N7G0 328 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 PPM1NQ8N819 430 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 FAM71DQ8N9W8 422 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 GAB3Q8WWW8 586 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 USP6NLQ92738 828 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 SLC13A1Q9BZW2 595 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 STN1Q9H668 368 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 XAB2Q9HCS7 855 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 KMT5AQ9NQR1 393 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 DTNAQ9Y4J8 743 aa17.75■□□□□ 0.43
SQSTM1-211ENST00000506690 CAPN8A6NHC0 703 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 CXorf49A8MYA2 514 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 DNAJA2O60884 412 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 CD48P09326 243 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 GRAMD1BQ3KR37 738 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 HSP90AA5PQ58FG0 334 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 DENND5BQ6ZUT9 1274 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ZNF606Q8WXB4 792 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 BSNDQ8WZ55 320 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 CCDC124Q96CT7 223 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 MAML3Q96JK9 1138 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 MRPS26Q9BYN8 205 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SENP6Q9GZR1 1112 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SUDS3Q9H7L9 328 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 KAT6AQ92794 2004 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ATP6V1G1O75348 118 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 GH2P01242 217 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 PMLP29590 882 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 CRKP46108 304 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ALDH1A3P47895 512 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ADARP55265 1226 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SLC25A11Q02978 314 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 KCNJ11Q14654 390 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 MYLK3Q32MK0 819 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ANO5Q75V66 913 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 CTAGE3PQ8IX95 158 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 ZNF778Q96MU6 729 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 LRRC37AA6NMS7 1700 aa17.74■□□□□ 0.43
SQSTM1-211ENST00000506690 HNRNPDLO14979 420 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-211ENST00000506690 SIN3BO75182 1162 aa17.73■□□□□ 0.43
SQSTM1-211ENST00000506690 CRHR1P34998 444 aa17.73■□□□□ 0.43
SQSTM1-211ENST00000506690 WNT7BP56706 349 aa17.73■□□□□ 0.43
SQSTM1-211ENST00000506690 TAP1Q03518 808 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms