RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 OTUD1Q5VV17 481 aaPredicted RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 DRICH1Q6PGQ1 229 aaPredicted RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 RPAINQ86UA6 219 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 FAM131BQ86XD5 332 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 DEFB106AQ8N104 65 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 HNRNPABQ99729 332 aaKnown RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 PCDH18Q9HCL0 1135 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 A0A0U1RQF3 1178 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 DPYSL4O14531 572 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 PIAS1O75925 651 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 INHAP05111 366 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 IRAK1P51617 712 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 LHX8Q68G74 356 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 SYDE1Q6ZW31 735 aaPredicted RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 SLC26A9Q7LBE3 791 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 MRPL10Q7Z7H8 261 aaKnown RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 PLD5Q8N7P1 536 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 MDM1Q8TC05 714 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 ADAM32Q8TC27 787 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 SPATA18Q8TC71 538 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 STK32AQ8WU08 396 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 LINC01599Q8WXQ3 324 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 SMOQ99835 787 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 CAPS2Q9BXY5 557 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 DUSP16Q9BY84 665 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
LIN54-206ENST00000506560 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 DNALI1O14645 258 aaPredicted RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 TOMM70O94826 608 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 ITGAVP06756 1048 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 RBP3P10745 1247 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 CKBP12277 381 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 NPR3P17342 541 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 RPL34P49207 117 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 KRT81Q14533 505 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 HMGB1P1B2RPK0 211 aaPredicted RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 CREB1P16220 341 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 GBP1P32455 592 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 RPL22P35268 128 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 ACAP1Q15027 740 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 RNF180Q86T96 592 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 RNF157Q96PX1 679 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 SLC38A7Q9NVC3 462 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 MTMR10Q9NXD2 777 aa12.73□□□□□ -0.37
LIN54-206ENST00000506560 DRG1Q9Y295 367 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.73□□□□□ -0.37
LIN54-206ENST00000506560 APOC4-APOC2K7ER74 178 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 APOC2P02655 101 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 PTK7Q13308 1070 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 SLMAPQ14BN4 828 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 DCAF6Q58WW2 860 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 RNASEH2BQ5TBB1 312 aaKnown RBP12.72□□□□□ -0.37
LIN54-206ENST00000506560 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 KDM7AQ6ZMT4 941 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 ZNF280BQ86YH2 543 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 RBM15Q96T37 977 aaKnown RBP eCLIP12.72□□□□□ -0.37
LIN54-206ENST00000506560 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
LIN54-206ENST00000506560 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 YJEFN3A6XGL0 299 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 E7ENQ6 273 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 AP1G2O75843 785 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 FYNP06241 537 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 ACTN2P35609 894 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 TKTL1P51854 596 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 SKOR1P84550 965 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 MSS51Q4VC12 460 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 FAM35AQ86V20 835 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 OR10T2Q8NGX3 314 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 KCTD15Q96SI1 283 aaPredicted RBP12.72□□□□□ -0.37
LIN54-206ENST00000506560 ULBP1Q9BZM6 244 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 SAYSD1Q9NPB0 183 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 ANLNQ9NQW6 1124 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 NAALADL1Q9UQQ1 740 aa12.72□□□□□ -0.37
LIN54-206ENST00000506560 I6L893 689 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms