RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 PIAS3Q9Y6X2 628 aa18.79■□□□□ 0.6
SMN1-204ENST00000506163 MYO16Q9Y6X6 1858 aa18.79■□□□□ 0.6
SMN1-204ENST00000506163 KANSL1LA0AUZ9 987 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 PES1O00541 588 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 SCAMP3O14828 347 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 DCNP07585 359 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 MBL2P11226 248 aaPredicted RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 TARSP26639 723 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 TUBP50607 506 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 TKTL1P51854 596 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 COPB1P53618 953 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 PM20D1Q6GTS8 502 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 PJA1Q8NG27 643 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 SHDQ96IW2 340 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 BPIFA3Q9BQP9 254 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 NAA15Q9BXJ9 866 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 ULBP1Q9BZM6 244 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 TLR8Q9NR97 1041 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 THG1LQ9NWX6 298 aaKnown RBP18.78■□□□□ 0.6
SMN1-204ENST00000506163 HESX1Q9UBX0 185 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
SMN1-204ENST00000506163 FAM170BA6NMN3 283 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 M0QYV0 167 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 MDM4O15151 490 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 TLR5O60602 858 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 LETM1O95202 739 aaPredicted RBP18.77■□□□□ 0.6
SMN1-204ENST00000506163 RGS7P49802 495 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 PDE6CP51160 858 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 PLCB2Q00722 1185 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 DENND1BQ6P3S1 775 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 CCDC105Q8IYK2 499 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 OSCP1Q8WVF1 389 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 ZNF606Q8WXB4 792 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 KCTD13Q8WZ19 329 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 LSM14BQ9BX40 385 aaKnown RBP18.77■□□□□ 0.6
SMN1-204ENST00000506163 LTB4R2Q9NPC1 389 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMN1-204ENST00000506163 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 SIT1Q9Y3P8 196 aa18.77■□□□□ 0.6
SMN1-204ENST00000506163 PIK3R2O00459 728 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 EPHB6O15197 1021 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 GREM1O60565 184 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 SETSIPP0DME0 302 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 RARGP13631 454 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 CLCN1P35523 988 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 USP8P40818 1118 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 GPD2P43304 727 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 ADIGQ0VDE8 80 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 RUNX3Q13761 415 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 DRAP1Q14919 205 aaPredicted RBP18.76■□□□□ 0.59
SMN1-204ENST00000506163 IQCB1Q15051 598 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 EML3Q32P44 896 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 NAIF1Q69YI7 327 aaPredicted RBP18.76■□□□□ 0.59
SMN1-204ENST00000506163 ZNF852Q6ZMS4 543 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 PRSS33Q8NF86 280 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 CSGALNACT1Q8TDX6 532 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 FAM81BQ96LP2 452 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 KLF16Q9BXK1 252 aaPredicted RBP18.76■□□□□ 0.59
SMN1-204ENST00000506163 GANQ9H2C0 597 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 DUS2Q9NX74 493 aaKnown RBP18.76■□□□□ 0.59
SMN1-204ENST00000506163 CYTH4Q9UIA0 394 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 NAGPAQ9UK23 515 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 CACNA1IQ9P0X4 2223 aa18.76■□□□□ 0.59
SMN1-204ENST00000506163 ZBED1O96006 694 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 UCHL3P15374 230 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 CTHP32929 405 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 MLLT6P55198 1093 aaPredicted RBP18.75■□□□□ 0.59
SMN1-204ENST00000506163 SLC8A3P57103 927 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 UBXN2BQ14CS0 331 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 STILQ15468 1287 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 ITPRIPL2Q3MIP1 535 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 CC2D1AQ6P1N0 951 aaPredicted RBP18.75■□□□□ 0.59
SMN1-204ENST00000506163 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 FAM3CQ92520 227 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 CACNA1HO95180 2353 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 MYOFQ9NZM1 2061 aa18.75■□□□□ 0.59
SMN1-204ENST00000506163 YJEFN3A6XGL0 299 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 E7ENQ6 273 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 SPECC1L-ADORA2AF8WAN1 911 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 LCP1P13796 627 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 GNA15P30679 374 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 RPL34P49207 117 aaKnown RBP18.74■□□□□ 0.59
SMN1-204ENST00000506163 ZNF165P49910 485 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 KPNA1P52294 538 aaPredicted RBP18.74■□□□□ 0.59
SMN1-204ENST00000506163 TCF15Q12870 199 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 PDGFRLQ15198 375 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 SLC47A2Q86VL8 602 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 WDTC1Q8N5D0 677 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 CLEC4CQ8WTT0 213 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 NAT10Q9H0A0 1025 aaKnown RBP18.74■□□□□ 0.59
SMN1-204ENST00000506163 ECT2Q9H8V3 914 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 PLCB1Q9NQ66 1216 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 CLIC5Q9NZA1 410 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 LGALS16A8MUM7 142 aa18.74■□□□□ 0.59
SMN1-204ENST00000506163 THAP12O43422 761 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms