RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ANKRD1Q15327 319 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
GYPB-204ENST00000504951 ENOX2Q16206 610 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 IL17AQ16552 155 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 FAM171BQ6P995 826 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 VSTM1Q6UX27 236 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ARMCX6Q7L4S7 300 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 LIMS2Q7Z4I7 341 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ARL14EPQ8N8R7 260 aaPredicted RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 IGSF22Q8N9C0 903 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ENGASEQ8NFI3 743 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 NXPE2Q96DL1 559 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 HAPLN2Q9GZV7 340 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 RPF1Q9H9Y2 349 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 ITM2CQ9NQX7 267 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ARHGEF4Q9NR80 690 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 TM7SF3Q9NS93 570 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 WSB2Q9NYS7 404 aaPredicted RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 CALCOCO1Q9P1Z2 691 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 CPSF3Q9UKF6 684 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 HCN2Q9UL51 889 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 DNM3Q9UQ16 869 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 HELZP42694 1942 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 ANAPC1Q9H1A4 1944 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 HECTD1Q9ULT8 2610 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 KNL1Q8NG31 2342 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 UNC79Q9P2D8 2635 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 ANTXRLA6NF34 631 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 METTL12A8MUP2 240 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 KPNA7A9QM74 516 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 B8ZZF3 427 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 E9PMD0 336 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 GABRDO14764 452 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 PPEF2O14830 753 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 CILPO75339 1184 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 PRPF40AO75400 957 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 WISP1O95388 367 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 OAS1P00973 400 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 FAM163BP0C2L3 166 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 OR52Z1P0C646 297 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 OXTRP30559 389 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 CCT6AP40227 531 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 PNPLA4P41247 253 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 MATKP42679 507 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 GRK6P43250 576 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 SLC6A11P48066 632 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 TRAPPC10P48553 1259 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 LHX1P48742 406 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 TOB1P50616 345 aaPredicted RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 SEC13P55735 322 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 NOP14P78316 857 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 BNC1Q01954 994 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 GAD2Q05329 585 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 MESP2Q0VG99 397 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 RESTQ13127 1097 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 ENPP2Q13822 863 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 TRIM29Q14134 588 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 E2F5Q15329 346 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 HLA-BQ31612 363 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 HYIQ5T013 277 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 EMC10Q5UCC4 262 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 SNX30Q5VWJ9 437 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 WSCD1Q658N2 575 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 KCNK18Q7Z418 384 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 FILIP1Q7Z7B0 1213 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 PGBD3Q8N328 593 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 ZNF513Q8N8E2 541 aaPredicted RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 TERB1Q8NA31 727 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 OR2I1PQ8NGU4 316 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 RHBDD1Q8TEB9 315 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 IPO4Q8TEX9 1081 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 BAP1Q92560 729 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 FGF11Q92914 225 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 CRELD1Q96HD1 420 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 MRGPRX1Q96LB2 322 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 RUSC1Q9BVN2 902 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 GAREM1Q9H706 876 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 FSCN3Q9NQT6 498 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 TMLHEQ9NVH6 421 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 GDAP2Q9NXN4 497 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 ABI2Q9NYB9 513 aaPredicted RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 TRPM5Q9NZQ8 1165 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 USP36Q9P275 1121 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 KIAA1024Q9UPX6 916 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 STYXL1Q9Y6J8 313 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 MYH11P35749 1972 aa6.43□□□□□ -1.38
GYPB-204ENST00000504951 ATXN2Q99700 1313 aaKnown RBP6.43□□□□□ -1.38
GYPB-204ENST00000504951 TSC2P49815 1807 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 C2orf78A6NCI8 922 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 TBC1D3BA6NDS4 549 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 ZNF840PA6NDX5 716 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 SFI1A8K8P3 1242 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 SLC16A4O15374 487 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 BCAT2O15382 392 aaPredicted RBP6.42□□□□□ -1.38
GYPB-204ENST00000504951 SIAH2O43255 324 aa6.42□□□□□ -1.38
GYPB-204ENST00000504951 TLX3O43711 291 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms