RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ZNF197O14709 1029 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 LSM8O95777 96 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM228BP0C875 321 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 CDC25CP30307 473 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 ACADSBP45954 432 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 DAOAP59103 153 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 TAF5Q15542 800 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 PM20D1Q6GTS8 502 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 ACAD10Q6JQN1 1059 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 TRIM72Q6ZMU5 477 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM183BPQ6ZVS7 135 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 DENND4AQ7Z401 1863 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 FGF13Q92913 245 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 RPGRIP1Q96KN7 1286 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 GCNAQ96QF7 691 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 CYP2S1Q96SQ9 504 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 SMG9Q9H0W8 520 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 AVENQ9NQS1 362 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 ADAMTS1Q9UHI8 967 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 NAGPAQ9UK23 515 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 ANAPC1Q9H1A4 1944 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 C2CD4DB7Z1M9 353 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 GOLGA8SH3BPF8 625 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 MDM4O15151 490 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 GRAP2O75791 330 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 GJB6O95452 261 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 TBX18O95935 607 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 YWHAGP61981 247 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 PTP4A2Q12974 167 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 ARL14EPQ8N8R7 260 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 EDEM1Q92611 657 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 MRPS31Q92665 395 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 C18orf8Q96DM3 657 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 NECTIN4Q96NY8 510 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 SLC46A2Q9BY10 475 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 NHEJ1Q9H9Q4 299 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 CNGB3Q9NQW8 809 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 IMPACTQ9P2X3 320 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 BZW2Q9Y6E2 419 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 DENND4CQ5VZ89 1909 aa13.93□□□□□ -0.18
PDLIM7-212ENST00000504380 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 FGF19O95750 216 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 FTLP02792 175 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 RARGP13631 454 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 MMP8P22894 467 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 CENPCQ03188 943 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 ASTE1Q2TB18 679 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 ARHGAP15Q53QZ3 475 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 BSPRYQ5W0U4 402 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 XYLT1Q86Y38 959 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 PHF13Q86YI8 300 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 PANX2Q96RD6 677 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 PHF7Q9BWX1 381 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 RNF38Q9H0F5 515 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 TLR8Q9NR97 1041 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 ADAM22Q9P0K1 906 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 CDH7Q9ULB5 785 aa13.92□□□□□ -0.18
PDLIM7-212ENST00000504380 DOCK8Q8NF50 2099 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 COCHO43405 550 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 FBXO21O94952 628 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 GABRB2P47870 512 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 RNASE9P60153 205 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 SLC6A3Q01959 620 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 MTF1Q14872 753 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 PUS10Q3MIT2 529 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM78AQ5JUQ0 283 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 HECTD3Q5T447 861 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 BTBD8Q5XKL5 378 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 OLFML1Q6UWY5 402 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 MON1BQ7L1V2 547 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 MON1AQ86VX9 555 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 MCOLN2Q8IZK6 566 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 TTC16Q8NEE8 873 aa13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-212ENST00000504380 OVCA2Q8WZ82 227 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms