RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RAI2Q9Y5P3 530 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 TBCAO75347 108 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 NEK4P51957 841 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 PSMC1P62191 440 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 RBP5P82980 135 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 TAF10Q12962 218 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 SUZ12Q15022 739 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 GRAMD4Q6IC98 578 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 DBX2Q6ZNG2 339 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 DPH6Q7L8W6 267 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 MRGPRX1Q96LB2 322 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 FIZ1Q96SL8 496 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 ACOX2Q99424 681 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 GABRG3Q99928 467 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 SPHK2Q9NRA0 654 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 FNDC3AQ9Y2H6 1198 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 MYH10P35580 1976 aa16.85■□□□□ 0.29
PDLIM7-210ENST00000503827 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 FAM149AA5PLN7 773 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 NCAM1P13591 858 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 HLA-BQ31612 363 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 LRRC69Q6ZNQ3 347 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 C8orf48Q96LL4 319 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 SLC6A17Q9H1V8 727 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 RAD54BQ9Y620 910 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 TMEM131Q92545 1883 aa16.84■□□□□ 0.29
PDLIM7-210ENST00000503827 MAST4O15021 2626 aa16.83■□□□□ 0.29
PDLIM7-210ENST00000503827 VWA3AA6NCI4 1184 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 F8VP50 259 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 CAPN9O14815 690 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 TRIM24O15164 1050 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 BCAT2O15382 392 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 HLA-EP13747 358 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 LMO2P25791 158 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 WNT7BP56706 349 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 IFRD2Q12894 506 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 MYO1EQ12965 1108 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 SMAD1Q15797 465 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 TMEM25Q86YD3 366 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 BRSK2Q8IWQ3 736 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 BBS7Q8IWZ6 715 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 ZNF843Q8N446 348 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 PDZD8Q8NEN9 1154 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 CADM4Q8NFZ8 388 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 TOE1Q96GM8 510 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 PCED1BQ96HM7 432 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 GPR174Q9BXC1 333 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 PRORYQ9H606 182 aa16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 WSB2Q9NYS7 404 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-210ENST00000503827 GFRA2O00451 464 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 SLC26A4O43511 780 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 TNFSF14O43557 240 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 PDGFRBP09619 1106 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 ITPKBP27987 946 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 ADSSP30520 456 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 DCAF12L1Q5VU92 463 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 METTL3Q86U44 580 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 IKZF4Q9H2S9 585 aa16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 RBAKQ9NYW8 714 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDLIM7-210ENST00000503827 J3QKU1 62 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 COCHO43405 550 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 LDHAP00338 332 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 YWHAQP27348 245 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 BNC1Q01954 994 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 HECTD3Q5T447 861 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 HVCN1Q96D96 273 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 NXPE2Q96DL1 559 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 SAAL1Q96ER3 474 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 ZFRQ96KR1 1074 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 SIX4Q9UIU6 781 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 BTBD3Q9Y2F9 522 aa16.81■□□□□ 0.28
PDLIM7-210ENST00000503827 KALRNO60229 2985 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 CYSRT1A8MQ03 144 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 METTL12A8MUP2 240 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 NEDD8-MDP1E9PL57 170 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms