RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CCSER2Q9H7U1 834 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 ANKRD11Q6UB99 2663 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-212ENST00000498540 IGHV1OR15-9A0A0B4J2B8 117 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 A0A1W2PQF6 199 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 TAF4O00268 1085 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 OPHN1O60890 802 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 HOXB2P14652 356 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 TNNC1P63316 161 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 CEBPZQ03701 1054 aaKnown RBP15.61■□□□□ 0.09
TRAF4-212ENST00000498540 ZNF33AQ06730 810 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 ACAP1Q15027 740 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 ANO4Q32M45 955 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 WDR72Q3MJ13 1102 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 ERICH6BQ5W0A0 696 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 BTBD8Q5XKL5 378 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 SLC36A4Q6YBV0 504 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 TRMT11Q7Z4G4 463 aaKnown RBP15.61■□□□□ 0.09
TRAF4-212ENST00000498540 TMEM25Q86YD3 366 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 SLC41A1Q8IVJ1 513 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 CCDC65Q8IXS2 484 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 RDH13Q8NBN7 331 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 PDZD8Q8NEN9 1154 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 SCAMP5Q8TAC9 235 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 OVCA2Q8WZ82 227 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 OTUB2Q96DC9 234 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 KCNK16Q96T55 309 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 CGRRF1Q99675 332 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 SPHK2Q9NRA0 654 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 DEC1Q9P2X7 70 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-212ENST00000498540 SH3BP1Q9Y3L3 701 aa15.61■□□□□ 0.09
TRAF4-212ENST00000498540 A8MXQ7 604 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 ARHGAP33O14559 1287 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 RTN3O95197 1032 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-212ENST00000498540 IRF1P10914 325 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 CD59P13987 128 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 TNNI1P19237 187 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 SNRNP35Q16560 246 aaKnown RBP15.6■□□□□ 0.09
TRAF4-212ENST00000498540 HECTD3Q5T447 861 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 EGFLAMQ63HQ2 1017 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 PDILTQ8N807 584 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 KCNV2Q8TDN2 545 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 HSPA12BQ96MM6 686 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 ACOX2Q99424 681 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 GZF1Q9H116 711 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-212ENST00000498540 CD248Q9HCU0 757 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 GMIPQ9P107 970 aa15.6■□□□□ 0.09
TRAF4-212ENST00000498540 ADAMTS20P59510 1910 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 FAM221BA6H8Z2 402 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 H0Y626 953 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 TRIM16O95361 564 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 CAPNS1P04632 268 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 NDUFV2P19404 249 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 NTSR1P30989 418 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 PGFP49763 221 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 SLC5A3P53794 718 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 MYL6P60660 151 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 CYP24A1Q07973 514 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 PSMD6Q15008 389 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 SNX30Q5VWJ9 437 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 RABEPKQ7Z6M1 372 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 RAB44Q7Z6P3 723 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-212ENST00000498540 FAM35AQ86V20 835 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 CCDC127Q96BQ5 260 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 DUSP9Q99956 384 aaKnown RBP15.59■□□□□ 0.09
TRAF4-212ENST00000498540 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 SLC6A17Q9H1V8 727 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 SMYD3Q9H7B4 428 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 KIAA1586Q9HCI6 787 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 AGPAT3Q9NRZ7 376 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 NXF1Q9UBU9 619 aaKnown RBP15.59■□□□□ 0.09
TRAF4-212ENST00000498540 CYP8B1Q9UNU6 501 aa15.59■□□□□ 0.09
TRAF4-212ENST00000498540 MYH10P35580 1976 aa15.58■□□□□ 0.09
TRAF4-212ENST00000498540 FAM163BP0C2L3 166 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 ZDHHC11BP0C7U3 371 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 TUBP50607 506 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 CYP2J2P51589 502 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF423Q2M1K9 1284 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 PREPLQ4J6C6 727 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-212ENST00000498540 GRAMD4Q6IC98 578 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 PAQR9Q6ZVX9 377 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 EPM2AIP1Q7L775 607 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-212ENST00000498540 PROSER1Q86XN7 944 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 TRIML1Q8N9V2 468 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 IPO4Q8TEX9 1081 aaKnown RBP15.58■□□□□ 0.08
TRAF4-212ENST00000498540 TRIM9Q9C026 710 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 DNAJC17Q9NVM6 304 aaKnown RBP15.58■□□□□ 0.08
TRAF4-212ENST00000498540 DNAAF2Q9NVR5 837 aaKnown RBP15.58■□□□□ 0.08
TRAF4-212ENST00000498540 IL37Q9NZH6 218 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 STARD13Q9Y3M8 1113 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 RAD54BQ9Y620 910 aa15.58■□□□□ 0.08
TRAF4-212ENST00000498540 PLXNB3Q9ULL4 1909 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 NEDD8-MDP1E9PL57 170 aa15.57■□□□□ 0.08
TRAF4-212ENST00000498540 CLIC2O15247 247 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms