RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 SEC23BQ15437 767 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 FAM69AQ5T7M9 428 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 EFCAB12Q6NXP0 572 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 MSANTD2Q6P1R3 559 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 SYNE3Q6ZMZ3 975 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 DIS3L2Q8IYB7 885 aaKnown RBP9.13□□□□□ -0.95
SNX13-212ENST00000498463 ABI1Q8IZP0 508 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 LRRC71Q8N4P6 559 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 LINS1Q8NG48 757 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 SLC22A17Q8WUG5 538 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 LRIG1Q96JA1 1093 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 SLF1Q9BQI6 1058 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 ITPAQ9BY32 194 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 PDCL3Q9H2J4 239 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 PLEKHA2Q9HB19 425 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 TMLHEQ9NVH6 421 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 VSX1Q9NZR4 365 aaPredicted RBP9.13□□□□□ -0.95
SNX13-212ENST00000498463 GIMAP2Q9UG22 337 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 USP22Q9UPT9 525 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 CAMK2AQ9UQM7 478 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 NAALADL1Q9UQQ1 740 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.13□□□□□ -0.95
SNX13-212ENST00000498463 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
SNX13-212ENST00000498463 PMS2P1A4D2B8 440 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 SLC38A8A6NNN8 435 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 AGPSO00116 658 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 CBFA2T3O75081 653 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 CLEC3BP05452 202 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 PORP16435 677 aaPredicted RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 DLX2Q07687 328 aaPredicted RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 ZNF568Q3ZCX4 644 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 NRN1LQ496H8 165 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 RILPL1Q5EBL4 403 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 TMEM108Q6UXF1 575 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 ATF7IPQ6VMQ6 1270 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 PXKQ7Z7A4 578 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 FAM71DQ8N9W8 422 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 RBM17Q96I25 401 aaKnown RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 ZNF512Q96ME7 567 aaPredicted RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 PHF7Q9BWX1 381 aaPredicted RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 BRF2Q9HAW0 419 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 EIF2B3Q9NR50 452 aaKnown RBP9.12□□□□□ -0.95
SNX13-212ENST00000498463 ZDHHC9Q9Y397 364 aa9.12□□□□□ -0.95
SNX13-212ENST00000498463 DRGXA6NNA5 263 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 ADM5C9JUS6 153 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 GTPBP1O00178 669 aaKnown RBP9.11□□□□□ -0.95
SNX13-212ENST00000498463 PEX12O00623 359 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 MSTNO14793 375 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 YY1P25490 414 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 HTR7P34969 479 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 SLC30A6Q6NXT4 461 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 POC1BQ8TC44 478 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 TMEM171Q8WVE6 324 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 ZBTB45Q96K62 511 aaPredicted RBP9.11□□□□□ -0.95
SNX13-212ENST00000498463 PTDSS2Q9BVG9 487 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 AGO3Q9H9G7 860 aaKnown RBP9.11□□□□□ -0.95
SNX13-212ENST00000498463 NTMQ9P121 344 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 TBC1D14Q9P2M4 693 aa9.11□□□□□ -0.95
SNX13-212ENST00000498463 NDRG4Q9ULP0 352 aaKnown RBP9.11□□□□□ -0.95
SNX13-212ENST00000498463 CCDC195A0A1B0GUA6 201 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 TSPY2A6NKD2 308 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 MATN2O00339 956 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 SEPT4O43236 478 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 DKC1O60832 514 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNX13-212ENST00000498463 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 LAMP2P13473 410 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 GCSHP23434 173 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 ARL3P36405 182 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 CHN2P52757 468 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 TSPY1Q01534 308 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 MPP3Q13368 585 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 MAMLD1Q13495 774 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 BECN1Q14457 450 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 WTAPQ15007 396 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 NFIL3Q16649 462 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 P3H1Q32P28 736 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 TBRG1Q3YBR2 411 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 LIPMQ5VYY2 423 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 FAM83AQ86UY5 434 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 RPAP2Q8IXW5 612 aaPredicted RBP9.1□□□□□ -0.95
SNX13-212ENST00000498463 ADSSL1Q8N142 457 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 ANKRD44Q8N8A2 993 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms