RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 NRLP54845 237 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 SLC8A3P57103 927 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 ZXDBP98169 803 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 LRMPQ12912 555 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 CCINQ13939 588 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 HSP90AA4PQ58FG1 418 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 TMEM196Q5HYL7 178 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 TSSK4Q6SA08 328 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 P2RY13Q9BPV8 354 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 LINC00597Q9H2U6 94 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 SCML2Q9UQR0 700 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 KIF26AQ9ULI4 1882 aaPredicted RBP16.18■□□□□ 0.18
NUP50-219ENST00000497960 PMM2O15305 246 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 P4HA2O15460 535 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 DRD1P21728 446 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 MTIF2P46199 727 aaKnown RBP16.17■□□□□ 0.18
NUP50-219ENST00000497960 ZNF165P49910 485 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 GAS6Q14393 721 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 FSTL4Q6MZW2 842 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 Q6ZS52 159 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 GPRIN1Q7Z2K8 1008 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 NT5C1BQ96P26 610 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 BPIFA3Q9BQP9 254 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 TSPY26PQ9H489 355 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 CCSER2Q9H7U1 834 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 TBC1D14Q9P2M4 693 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 PATJQ8NI35 1801 aa16.17■□□□□ 0.18
NUP50-219ENST00000497960 E2F8A0AVK6 867 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 SMTNL1A8MU46 457 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 BECN2A8MW95 431 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 TLR5O60602 858 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 GALK1P51570 392 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
NUP50-219ENST00000497960 SATB1Q01826 763 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 FBXO43Q4G163 708 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 ARHGAP17Q68EM7 881 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 ZBTB44Q8NCP5 570 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 CD101Q93033 1021 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
NUP50-219ENST00000497960 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
NUP50-219ENST00000497960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUP50-219ENST00000497960 KCNJ18B7U540 433 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 CYP26A1O43174 497 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 ATG13O75143 517 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 CD19P15391 556 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 ATP5C1P36542 298 aaKnown RBP16.15■□□□□ 0.18
NUP50-219ENST00000497960 KIF11P52732 1056 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 GOLGA8FQ08AF8 430 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 GOLGA8DPQ0D2H9 430 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 KCNJ12Q14500 433 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 SGO2Q562F6 1265 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 TRIM59Q8IWR1 403 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 ANKRD52Q8NB46 1076 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 NELL1Q92832 810 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 CHFRQ96EP1 664 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 CYLDQ9NQC7 956 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 HESX1Q9UBX0 185 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 GPR179Q6PRD1 2367 aa16.15■□□□□ 0.18
NUP50-219ENST00000497960 HELZP42694 1942 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 A0A1W2PQH9 124 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 SCAMP3O14828 347 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 PAPSS2O95340 614 aaPredicted RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 CAVIN2O95810 425 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 ADH1CP00326 375 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 EGFP01133 1207 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 TDGF1P13385 188 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 PGFP49763 221 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 PSEN1P49768 467 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 TPM4P67936 248 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 KCNH2Q12809 1159 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 DHCR24Q15392 516 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 PPM1KQ8N3J5 372 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 CCDC26Q8TAB7 109 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 OTUB2Q96DC9 234 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 ZFRQ96KR1 1074 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
NUP50-219ENST00000497960 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 KIAA1257Q9ULG3 409 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 ATG2BQ96BY7 2078 aa16.14■□□□□ 0.17
NUP50-219ENST00000497960 PES1O00541 588 aaKnown RBP16.13■□□□□ 0.17
NUP50-219ENST00000497960 LILRB5O75023 590 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 RNF40O75150 1001 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 TBX18O95935 607 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 CYP17A1P05093 508 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 TPM2P07951 284 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 RALAP11233 206 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 VDRP11473 427 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms