RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 CEP295NLQ96MC4 621 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 MAFFQ9ULX9 164 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 AP4E1Q9UPM8 1137 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 ZNFX1Q9P2E3 1918 aaKnown RBP8.73□□□□□ -1.01
USP54-215ENST00000497106 FGBP02675 491 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 BRCC3P46736 316 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 WNT7BP56706 349 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 CENPUQ71F23 418 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 VSIG1Q86XK7 387 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 CFAP57Q96MR6 1250 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 CPXM1Q96SM3 734 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 LRRC1Q9BTT6 524 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 SDCBP2Q9H190 292 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 GOLPH3Q9H4A6 298 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 PAK5Q9P286 719 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 A0A0U1RQJ8 604 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 CCDC149Q6ZUS6 474 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 PALB2Q86YC2 1186 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 ATRIPQ8WXE1 791 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 ZNF670Q9BS34 389 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 ULBP1Q9BZM6 244 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 WDCPQ9H6R7 721 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 PPCSQ9HAB8 311 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 DDIT4Q9NX09 232 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 LSM7Q9UK45 103 aaKnown RBP8.73□□□□□ -1.01
USP54-215ENST00000497106 CLUHO75153 1309 aa8.73□□□□□ -1.01
USP54-215ENST00000497106 PTGESO14684 152 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 GRAP2O75791 330 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 TRUB2O95900 331 aaKnown RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 RFC1P35251 1148 aaPredicted RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 GLUD2P49448 558 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PLTPP55058 493 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PSMD5Q16401 504 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 DEFB106AQ8N104 65 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 NUP93Q8N1F7 819 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 FAM71BQ8TC56 605 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 RIN2Q8WYP3 895 aaPredicted RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 KRT35Q92764 455 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 MRPL17Q9NRX2 175 aaKnown RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 TRPM5Q9NZQ8 1165 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 COG5Q9UP83 839 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 ARID2Q68CP9 1835 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 HACD1B0YJ81 288 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PIK3R2O00459 728 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 FSCN2O14926 492 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 RAD51CO43502 376 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CST8O60676 142 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 IGHA2P01877 340 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 LRG1P02750 347 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 BDNFP23560 247 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 MIPP30301 263 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PTPN7P35236 360 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 ARL4CP56559 192 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 ANO4Q32M45 955 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 P3H1Q32P28 736 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CCNI2Q6ZMN8 369 aaPredicted RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 UNC45BQ8IWX7 931 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CMTR2Q8IYT2 770 aaKnown RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 PDIK1LQ8N165 341 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 LZTR1Q8N653 840 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 MICAL1Q8TDZ2 1067 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 WHRNQ9P202 907 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 RAB21Q9UL25 225 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 M0QZQ0 153 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CREB3O43889 395 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 FGF19O95750 216 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CSH1P0DML2 217 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CSH2P0DML3 217 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 MAGEA11P43364 429 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 FPGSQ05932 587 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 TRIM71Q2Q1W2 868 aaKnown RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 SLC25A52Q3SY17 297 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 BRMS1LQ5PSV4 323 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 TPGS2Q68CL5 300 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 EMC1Q8N766 993 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 C12orf29Q8N999 325 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CCNYQ8ND76 341 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 C1orf54Q8WWF1 131 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CCR1P32246 355 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 PPP3CCP48454 512 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CDK7P50613 346 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 FAM189BP81408 668 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 C1orf53Q5VUE5 145 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 VPS52Q8N1B4 723 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 NOA1Q8NC60 698 aaKnown RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 FAM76AQ8TAV0 307 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 CHORDC1Q9UHD1 332 aaPredicted RBP8.72□□□□□ -1.01
USP54-215ENST00000497106 PCYOX1Q9UHG3 505 aa8.72□□□□□ -1.01
USP54-215ENST00000497106 DRG1Q9Y295 367 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms