RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TLX1P31314 330 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 ICAM3P32942 547 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 BSGP35613 385 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GGT5P36269 586 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ARL3P36405 182 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 EIF2DP41214 584 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 HARS2P49590 506 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 BCAT1P54687 386 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ALDH18A1P54886 795 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 NRG3P56975 720 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CTXN1P60606 82 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RPS3AP61247 264 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 IL1RL1Q01638 556 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CYP27A1Q02318 531 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TCF15Q12870 199 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LRMPQ12912 555 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 IRF3Q14653 427 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LASP1Q14847 261 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 SLMAPQ14BN4 828 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TNIP1Q15025 636 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PPP2R5BQ15173 497 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 STILQ15468 1287 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TAF7Q15545 349 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 GPR68Q15743 365 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 NPY5RQ15761 445 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 DGKDQ16760 1214 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 WSCD2Q2TBF2 565 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GALNTL6Q49A17 601 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CYP27C1Q4G0S4 372 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SLC44A4Q53GD3 710 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PLEKHS1Q5SXH7 462 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ERMARDQ5T6L9 678 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GARNL3Q5VVW2 1013 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 HLA-DQA1Q5Y7H0 255 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GPR139Q6DWJ6 353 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ISM2Q6H9L7 571 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RAB12Q6IQ22 244 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 MTFR2Q6P444 385 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TRAT1Q6PIZ9 186 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ZDHHC24Q6UX98 284 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ABHD15Q6UXT9 468 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ARHGAP27Q6ZUM4 889 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LRRC8DQ7L1W4 858 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PLPPR4Q7Z2D5 763 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CPLX4Q7Z7G2 160 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GALNT7Q86SF2 657 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GPR149Q86SP6 731 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ARHGEF25Q86VW2 580 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PROSER1Q86XN7 944 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CCDC117Q8IWD4 279 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 SPACA3Q8IXA5 215 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SAMD14Q8IZD0 417 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 UNC5BQ8IZJ1 945 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 WDTC1Q8N5D0 677 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 OTUD6BQ8N6M0 293 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 AOPEPQ8N6M6 819 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TDRD5Q8NAT2 981 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 PIK3C3Q8NEB9 887 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 OR5AN1Q8NGI8 311 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 FBLIM1Q8WUP2 373 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ZNF480Q8WV37 535 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SNX33Q8WV41 574 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CASKIN2Q8WXE0 1202 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SEPT1Q8WYJ6 367 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TBC1D5Q92609 795 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ZNF622Q969S3 477 aaKnown RBP eCLIP2.08□□□□□ -2.08
UBR4-217ENST00000497018 ACDQ96AP0 544 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CYFIP2Q96F07 1278 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PGAP3Q96FM1 320 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 RBM18Q96H35 190 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 APOPT1Q96IL0 206 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 HHIPL1Q96JK4 782 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CABS1Q96KC9 395 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ATP6V0BQ99437 205 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 NOL10Q9BSC4 688 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 ANKRD2Q9GZV1 360 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SLC25A18Q9H1K4 315 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 NDST4Q9H3R1 872 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ST6GALNAC4Q9H4F1 302 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RABEP2Q9H5N1 569 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 AKTIPQ9H8T0 292 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CHODLQ9H9P2 273 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 BCO1Q9HAY6 547 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 MKNK2Q9HBH9 465 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SEMA4BQ9NPR2 832 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 FSCN3Q9NQT6 498 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SEMA3GQ9NS98 782 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TBC1D23Q9NUY8 699 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 UCKL1Q9NWZ5 548 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TAS2R10Q9NYW0 307 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 HSPBP1Q9NZL4 362 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LMCD1Q9NZU5 365 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 MARCH4Q9P2E8 410 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 DNAJB9Q9UBS3 223 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 DKK4Q9UBT3 224 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SLC25A10Q9UBX3 287 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 RASAL2Q9UJF2 1139 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ZNF215Q9UL58 517 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 MKL2Q9ULH7 1088 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RABL2BQ9UNT1 228 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms