RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 KCNN1Q92952 543 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 LPPQ93052 612 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 PAFAH2Q99487 392 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
PDE6B-212ENST00000496514 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 HESX1Q9UBX0 185 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 STK38LQ9Y2H1 464 aa12.84□□□□□ -0.35
PDE6B-212ENST00000496514 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
PDE6B-212ENST00000496514 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 I3L4J1 428 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 BEST1O76090 585 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 IL4RP24394 825 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 BCAR1P56945 870 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 OLIG2Q13516 323 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 TRPM8Q7Z2W7 1104 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PLEKHH3Q7Z736 793 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 NAT8LQ8N9F0 302 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 CENPTQ96BT3 561 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 CNPY3Q9BT09 278 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 ITGA11Q9UKX5 1188 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 APOC2P02655 101 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 HDAC4P56524 1084 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 ARL4CP56559 192 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 KCNJ2P63252 427 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 MGAT5Q09328 741 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 LCLAT1Q6UWP7 414 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 UNC5BQ8IZJ1 945 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 CMASQ8NFW8 434 aaPredicted RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 CKAP2Q8WWK9 683 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 SMC6Q96SB8 1091 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 GCOM2Q9BZD3 368 aaPredicted RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 GBA2Q9HCG7 927 aaPredicted RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 MAD1L1Q9Y6D9 718 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 FAM47DPA6NHR8 397 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 A8MUI8 341 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 GPR32O75388 356 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 FSBPO95073 299 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 TOP3BO95985 862 aaKnown RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 TAC1P20366 129 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 AMPD1P23109 780 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 COPS2P61201 443 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 IRX4P78413 519 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 NME3Q13232 169 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 E2F5Q15329 346 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 KBTBD12Q3ZCT8 623 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 LVRNQ6Q4G3 990 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PLD5Q8N7P1 536 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 HASPINQ8TF76 798 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 PITPNM3Q9BZ71 974 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDE6B-212ENST00000496514 SEPT10Q9P0V9 454 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 RABGEF1Q9UJ41 708 aa12.83□□□□□ -0.36
PDE6B-212ENST00000496514 SMIM28A0A1B0GU29 152 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 MYADML2A6NDP7 307 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 ALOX15BO15296 676 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 ZBED1O96006 694 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 ATP5DP30049 168 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 GMPRP36959 345 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 GRM5P41594 1212 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 SLC10A2Q12908 348 aaPredicted RBP12.82□□□□□ -0.36
PDE6B-212ENST00000496514 FAM187BQ17R55 369 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 MPP5Q8N3R9 675 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 TBC1D31Q96DN5 1066 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 SNX27Q96L92 541 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 ABHD16BQ9H3Z7 469 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 PCDH18Q9HCL0 1135 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 WDR35Q9P2L0 1181 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 DCTN4Q9UJW0 460 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 USP15Q9Y4E8 981 aaPredicted RBP12.82□□□□□ -0.36
PDE6B-212ENST00000496514 GTF2A2P52657 109 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 IFRD2Q12894 506 aaPredicted RBP12.82□□□□□ -0.36
PDE6B-212ENST00000496514 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 PDIK1LQ8N165 341 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 PPM1NQ8N819 430 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 NSRP1Q9H0G5 558 aaKnown RBP12.82□□□□□ -0.36
PDE6B-212ENST00000496514 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
PDE6B-212ENST00000496514 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms