RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TTC25Q96NG3 672 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 NT5C1AQ9BXI3 368 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 DPEP3Q9H4B8 488 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 ARL8BQ9NVJ2 186 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 WDR27A2RRH5 827 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 CXorf49A8MYA2 514 aaPredicted RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 TYK2P29597 1187 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 ARL4AP40617 200 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 SEPT6Q14141 434 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 TTLL4Q14679 1199 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 WDR49Q8IV35 697 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 MPP5Q8N3R9 675 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 CCNYL1Q8N7R7 359 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 GBP7Q8N8V2 638 aaPredicted RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 SLC26A7Q8TE54 656 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 AZIN2Q96A70 460 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 SRPK1Q96SB4 655 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 STK10O94804 968 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 IQCF3P0C7M6 154 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 ARF4P18085 180 aaPredicted RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 ARPP19P56211 112 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 PMF1Q6P1K2 205 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 C3orf20Q8ND61 904 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 MRPL45Q9BRJ2 306 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 COL22A1Q8NFW1 1626 aaPredicted RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 CIB2O75838 187 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 USP1O94782 785 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 LYPLA2O95372 231 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 XRCC4Q13426 336 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 UBAP2LQ14157 1087 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 MORF4L2Q15014 288 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 PPM1JQ5JR12 505 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 VWA5B1Q5TIE3 1220 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 EIF1ADQ8N9N8 165 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 STKLD1Q8NE28 680 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 ZNF358Q9NW07 568 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
GPC1-209ENST00000495100 DLGAP2Q9P1A6 1054 aa13.98□□□□□ -0.17
GPC1-209ENST00000495100 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 TBC1D12O60347 775 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 OPHN1O60890 802 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 DNAJC6O75061 913 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 SMIM24O75264 130 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 FKBP1AP62942 108 aaKnown RBP13.97□□□□□ -0.17
GPC1-209ENST00000495100 TSNAXIP1Q2TAA8 658 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 KLHL38Q2WGJ6 581 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 LGSNQ5TDP6 509 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 KCNT2Q6UVM3 1135 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 NTPCRQ9BSD7 190 aaKnown RBP13.97□□□□□ -0.17
GPC1-209ENST00000495100 PCDH9Q9HC56 1237 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 MSCO60682 206 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 ZNF618Q5T7W0 954 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 CMC1Q7Z7K0 106 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 PHF13Q86YI8 300 aaPredicted RBP13.97□□□□□ -0.17
GPC1-209ENST00000495100 MARK4Q96L34 752 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 SNX10Q9Y5X0 201 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 UNC5CO95185 931 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 FGFR1P11362 822 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 KCNA3P22001 575 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 TFDP2Q14188 446 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 CYP1B1Q16678 543 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 LMNTD2Q8IXW0 634 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 CCHCR1Q8TD31 782 aa13.97□□□□□ -0.17
GPC1-209ENST00000495100 E9PBE3 544 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 KLHL41O60662 606 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 ZC3H11AO75152 810 aaKnown RBP eCLIP13.96□□□□□ -0.17
GPC1-209ENST00000495100 SERPINB4P48594 390 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 RNASEH2BQ5TBB1 312 aaKnown RBP13.96□□□□□ -0.17
GPC1-209ENST00000495100 SYDE1Q6ZW31 735 aaPredicted RBP13.96□□□□□ -0.17
GPC1-209ENST00000495100 TP53INP2Q8IXH6 220 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 FAM13CQ8NE31 585 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 SLC2A14Q8TDB8 520 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 FBXL18Q96ME1 805 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 SNRNP25Q9BV90 132 aaKnown RBP13.96□□□□□ -0.17
GPC1-209ENST00000495100 NMUR2Q9GZQ4 415 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 ZFATQ9P243 1243 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 CLUHO75153 1309 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 FCHO1O14526 889 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 GOT1P17174 413 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 CYP2F1P24903 491 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 IREB2P48200 963 aaKnown RBP13.96□□□□□ -0.17
GPC1-209ENST00000495100 SULT1E1P49888 294 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 MYO9BQ13459 2157 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 RASA2Q15283 850 aa13.96□□□□□ -0.17
GPC1-209ENST00000495100 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms