RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZACNQ401N2 412 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 KMT5BQ4FZB7 885 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 TTC30AQ86WT1 665 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 ZMIZ2Q8NF64 920 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 OLIG1Q8TAK6 271 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 PAGE5Q96GU1 130 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 KRT82Q9NSB4 513 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 RCOR1Q9UKL0 485 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 SH3BP1Q9Y3L3 701 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 SGK1O00141 431 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 P4HA1P13674 534 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 PMLP29590 882 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 TNFRSF4P43489 277 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 PKP1Q13835 747 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 SGSM1Q2NKQ1 1148 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 EMC10Q5UCC4 262 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 PHTF2Q8N3S3 785 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 SMOQ99835 787 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 DUSP9Q99956 384 aaKnown RBP23.39■■□□□ 1.33
HDDC3-203ENST00000494993 POLMQ9NP87 494 aaPredicted RBP23.39■■□□□ 1.33
HDDC3-203ENST00000494993 ANGPTL2Q9UKU9 493 aa23.39■■□□□ 1.33
HDDC3-203ENST00000494993 LNP1A1A4G5 178 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 PDXKO00764 312 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 KRT37O76014 449 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 KCNK5O95279 499 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 NR3C1P04150 777 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 CCDC130P13994 396 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 NDST1P52848 882 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 ORC1Q13415 861 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 EOGTQ5NDL2 527 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 CYP2U1Q7Z449 544 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 ETFBKMTQ8IXQ9 262 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 TMC2Q8TDI7 906 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 TAF4BQ92750 862 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 CSNK1G1Q9HCP0 422 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 HMGXB4Q9UGU5 601 aa23.38■■□□□ 1.33
HDDC3-203ENST00000494993 ASCC3Q8N3C0 2202 aaKnown RBP23.37■■□□□ 1.33
HDDC3-203ENST00000494993 HOXC11O43248 304 aaPredicted RBP23.37■■□□□ 1.33
HDDC3-203ENST00000494993 BEST1O76090 585 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 RPN1P04843 607 aaKnown RBP23.37■■□□□ 1.33
HDDC3-203ENST00000494993 P2RY2P41231 377 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 ST3GAL2Q16842 350 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 BTBD8Q5XKL5 378 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 SV2AQ7L0J3 742 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 UNC93AQ86WB7 457 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 BBS7Q8IWZ6 715 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 CRYBG2Q8N1P7 616 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 SLC2A14Q8TDB8 520 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 WHAMMQ8TF30 809 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 WBP2Q969T9 261 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 NACA2Q9H009 215 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 FBXO44Q9H4M3 255 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 ZDHHC4Q9NPG8 344 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 USP24Q9UPU5 2620 aa23.37■■□□□ 1.33
HDDC3-203ENST00000494993 C4orf47A7E2U8 309 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 KHNYNO15037 678 aaKnown RBP23.36■■□□□ 1.33
HDDC3-203ENST00000494993 TLR5O60602 858 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 ADAM23O75077 832 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 ASS1P00966 412 aaKnown RBP23.36■■□□□ 1.33
HDDC3-203ENST00000494993 IRF1P10914 325 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 DHPSP49366 369 aaPredicted RBP23.36■■□□□ 1.33
HDDC3-203ENST00000494993 NAT16Q8N8M0 369 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 RLN3Q8WXF3 142 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 SPHK2Q9NRA0 654 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 FAM49BQ9NUQ9 324 aa23.36■■□□□ 1.33
HDDC3-203ENST00000494993 A0A1B0GVL5 298 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 TBC1D3BA6NDS4 549 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 IKBKBO14920 756 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 TULP3O75386 442 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 PFKFB1P16118 471 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 ASPAP45381 313 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 PGFP49763 221 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 MAP3K7CLP57077 242 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 PREPLQ4J6C6 727 aaPredicted RBP23.35■■□□□ 1.33
HDDC3-203ENST00000494993 C1orf220Q5T0J3 134 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 CEP135Q66GS9 1140 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 SPOPLQ6IQ16 392 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 PSAPL1Q6NUJ1 521 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 C12orf29Q8N999 325 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 SPACA7Q96KW9 195 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 TLR8Q9NR97 1041 aaKnown RBP23.35■■□□□ 1.33
HDDC3-203ENST00000494993 BCCIPQ9P287 314 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDDC3-203ENST00000494993 DEC1Q9P2X7 70 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 USP25Q9UHP3 1055 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 CIZ1Q9ULV3 898 aaPredicted RBP23.35■■□□□ 1.33
HDDC3-203ENST00000494993 FRMD4BQ9Y2L6 1034 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 ADAMTS9Q9P2N4 1935 aa23.35■■□□□ 1.33
HDDC3-203ENST00000494993 PATE3B3GLJ2 98 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 HLA-DRAP01903 254 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 MYL1P05976 194 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 PIK3CAP42336 1068 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 SHC2P98077 582 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 ANO4Q32M45 955 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 DAB2IPQ5VWQ8 1189 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 LPCAT2Q7L5N7 544 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 TMEM25Q86YD3 366 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 TERB1Q8NA31 727 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 HMGB4Q8WW32 186 aa23.34■■□□□ 1.33
HDDC3-203ENST00000494993 PIGKQ92643 395 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms