RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ALPK1Q96QP1 1244 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF347Q96SE7 839 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 POP1Q99575 1024 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FGFBP2Q9BYJ0 223 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 C6orf50Q9HD87 102 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 IL17RBQ9NRM6 502 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TAS2R14Q9NYV8 317 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TBK1Q9UHD2 729 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DCTN4Q9UJW0 460 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SATB2Q9UPW6 733 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 APOBEC2Q9Y235 224 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 N6AMT1Q9Y5N5 214 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FAM172BPA6NC97 362 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 H3BMQ9 156 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CLOCKO15516 846 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ENO1P06733 434 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PSMC3P17980 439 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 KCNJ1P48048 391 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FMO5P49326 533 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SLC5A3P53794 718 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CTSWP56202 376 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CDKL1Q00532 357 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 EIF2B5Q13144 721 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SELPLGQ14242 412 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FASTKD5Q7L8L6 764 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 GPR141Q7Z602 305 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TTC30AQ86WT1 665 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 IFNL2Q8IZJ0 200 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CDK5RAP3Q96JB5 506 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 BTN2A3PQ96KV6 586 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 COG8Q96MW5 612 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FERMT1Q9BQL6 677 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 HOXD1Q9GZZ0 328 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 EHD1Q9H4M9 534 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DNMT3BQ9UBC3 853 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ARPP21Q9UBL0 812 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SNCAIPQ9Y6H5 919 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ZHX2Q9Y6X8 837 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CYP3A7-CYP3A51PA0A087WV96 503 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FADS2P1A8MWK0 482 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 E5RJQ4 531 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PSMD12O00232 456 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CCNT1O60563 726 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TOM1O60784 492 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NR3C1P04150 777 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CCDC159P0C7I6 412 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 MSL3P1P0C860 447 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CYP3A7P24462 503 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 S100A5P33763 92 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 RFC1P35251 1148 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NUDT1P36639 197 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NDST2P52849 883 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NDUFAF5Q5TEU4 345 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TMEM214Q6NUQ4 689 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TIFABQ6ZNK6 161 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 GALNT13Q8IUC8 556 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 C4orf33Q8N1A6 199 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FIBCD1Q8N539 461 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SLC44A1Q8WWI5 657 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NLRP7Q8WX94 980 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NACC1Q96RE7 527 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PARVAQ9NVD7 372 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SLC17A7Q9P2U7 560 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PCDHGB4Q9UN71 923 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 DNAJC16Q9Y2G8 782 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PTPN22Q9Y2R2 807 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PCDHGB5Q9Y5G0 923 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PCDHGA11Q9Y5H2 935 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 IQANK1A0A1B0GTG1 560 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PRR5-ARHGAP8B1AHC4 643 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NUAK1O60285 661 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A9O60656 530 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 DNAJB5O75953 348 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ITGAVP06756 1048 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A6P19224 532 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A1P22309 533 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A4P22310 534 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 MYF6P23409 242 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A3P35503 534 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A5P35504 534 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ADCY8P40145 1251 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 BMXP51813 675 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ARHGAP8P85298 464 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CBX2Q14781 532 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 LRRC41Q15345 812 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 KRT39Q6A163 491 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FAM117BQ6P1L5 589 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 KRT28Q7Z3Y7 464 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 AMIGO2Q86SJ2 522 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PRUNE1Q86TP1 453 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PROSER2Q86WR7 435 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 HEATR4Q86WZ0 1026 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 C12orf56Q8IXR9 622 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FAM71AQ8IYT1 594 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 EXD1Q8NHP7 514 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF564Q8TBZ8 553 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 EPS8L1Q8TE68 723 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SNX29Q8TEQ0 813 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms