RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 NR2F6P10588 404 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ZFXP17010 805 aaPredicted RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 YY1P25490 414 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 GABRB3P28472 473 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 TRAPPC10P48553 1259 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ALDH9A1P49189 494 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 GATMP50440 423 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 PDE1AP54750 535 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ICA1Q05084 483 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 GPS1Q13098 491 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 TRIM14Q14142 442 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 LY6KQ17RY6 165 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 MANEALQ5VSG8 457 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 SLC9A4Q6AI14 798 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 GGT6Q6P531 493 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 CAND1Q86VP6 1230 aaKnown RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 KRT73Q86Y46 540 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 LRRC71Q8N4P6 559 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 GLIS1Q8NBF1 620 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 FAM98AQ8NCA5 519 aaKnown RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 CAGE1Q8TC20 777 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ZBTB45Q96K62 511 aaPredicted RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 HIST1H2AAQ96QV6 131 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 DPCDQ9BVM2 203 aaPredicted RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 AS3MTQ9HBK9 375 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ZBTB26Q9HCK0 441 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 NECTIN3Q9NQS3 549 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 DKK3Q9UBP4 350 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
VTA1-204ENST00000491881 ZMYND8Q9ULU4 1186 aaPredicted RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 DRG1Q9Y295 367 aaKnown RBP4.61□□□□□ -1.67
VTA1-204ENST00000491881 WDR27A2RRH5 827 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 KCNQ3O43525 872 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 SKAP2O75563 359 aaPredicted RBP4.6□□□□□ -1.67
VTA1-204ENST00000491881 VNN1O95497 513 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 EGR1P18146 543 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 RBL1P28749 1068 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 NTSR1P30989 418 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 TPTEP56180 551 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 ELF2Q15723 593 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 RAB30Q15771 203 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 MAPKAPK3Q16644 382 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 ARL6IP4Q66PJ3 421 aaKnown RBP4.6□□□□□ -1.67
VTA1-204ENST00000491881 USP49Q70CQ1 688 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 PEG10Q86TG7 708 aaKnown RBP4.6□□□□□ -1.67
VTA1-204ENST00000491881 RAB11FIP4Q86YS3 637 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 FSTL5Q8N475 847 aaPredicted RBP4.6□□□□□ -1.67
VTA1-204ENST00000491881 ZNF384Q8TF68 577 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 SOCS4Q8WXH5 440 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 SLC9A6Q92581 669 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 C18orf8Q96DM3 657 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
VTA1-204ENST00000491881 FAM227BQ96M60 508 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 VN1R3Q9BXE9 311 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 SH2B3Q9UQQ2 575 aa4.6□□□□□ -1.67
VTA1-204ENST00000491881 PROB1E7EW31 1015 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 IFRD1O00458 451 aaPredicted RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 TCEA3O75764 348 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 TTLL1O95922 423 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 EBLN1P0CF75 366 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 CD19P15391 556 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 PECAM1P16284 738 aaPredicted RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 NDUFB7P17568 137 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 MST1P26927 711 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 MPLP40238 635 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 GRIA3P42263 894 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
VTA1-204ENST00000491881 NSUN2Q08J23 767 aaKnown RBP eCLIP4.59□□□□□ -1.67
VTA1-204ENST00000491881 KRT72Q14CN4 511 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 PUM3Q15397 648 aaKnown RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 SLC5A9Q2M3M2 681 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 FAM83BQ5T0W9 1011 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 GORABQ5T7V8 394 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 RAP1GAP2Q684P5 730 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 KIAA0895LQ68EN5 471 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 KIAA0408Q6ZU52 694 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 ZNF551Q7Z340 670 aaPredicted RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 MBD3L2Q8NHZ7 208 aaPredicted RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
VTA1-204ENST00000491881 ABHD5Q8WTS1 349 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 RFKQ969G6 155 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 ZDHHC12Q96GR4 267 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 GDF15Q99988 308 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 PTPRHQ9HD43 1115 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 ARHGEF3Q9NR81 526 aa4.59□□□□□ -1.67
VTA1-204ENST00000491881 GOLGA6L3A6NEY3 463 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 LINC00473A8K010 186 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 EXOC5O00471 708 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 PIP5K1BO14986 540 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 EIF3JO75822 258 aaKnown RBP4.58□□□□□ -1.68
VTA1-204ENST00000491881 PRKCBP05771 671 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 DLDP09622 509 aaKnown RBP4.58□□□□□ -1.68
VTA1-204ENST00000491881 SRGAP2BP0DMP2 458 aa4.58□□□□□ -1.68
VTA1-204ENST00000491881 SLC5A2P31639 672 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms