RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PPIP5K1Q6PFW1 1433 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 A0A087WV62 115 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 A0A087X0M5 115 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 A0A1B0GX30 115 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 CAPN14A8MX76 684 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 FAM227AF5H4B4 570 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 K7ESM1 405 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 TEX33O43247 280 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 HOXA3O43365 443 aaPredicted RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 AHCYL1O43865 530 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 IPO13O94829 963 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 HSPA4LO95757 839 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 RPLP2P05387 115 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 RAP2AP10114 183 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 DDCP20711 480 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 COMTP21964 271 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 TMPOP42166 694 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 LIMK1P53667 647 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 DCAF7P61962 342 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 EIF2B5Q13144 721 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 GALNT17Q6IS24 598 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 TATDN1Q6P1N9 297 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 DOK3Q7L591 496 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 EPHX4Q8IUS5 362 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 MB21D1Q8N884 522 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 FAM156AQ8NDB6 213 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 IFI44Q8TCB0 444 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 Q8TCH9 128 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 BRSK1Q8TDC3 778 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 DIS3LQ8TF46 1054 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 UCMAQ8WVF2 138 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 RGMAQ96B86 450 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 UROC1Q96N76 676 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 GSDMAQ96QA5 445 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 GPR20Q99678 358 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 NUP62CLQ9H1M0 184 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 CERS4Q9HA82 394 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 HPF1Q9NWY4 346 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 KCTD5Q9NXV2 234 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 MOCS1Q9NZB8 636 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 GPRC5BQ9NZH0 403 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 DUSP12Q9UNI6 340 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 RUVBL1Q9Y265 456 aaKnown RBP5.17□□□□□ -1.58
RTN4-215ENST00000491592 PCDHB1Q9Y5F3 818 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.17□□□□□ -1.582e-12■□□□□ 8.5
RTN4-215ENST00000491592 ARHGAP5Q13017 1502 aa5.17□□□□□ -1.58
RTN4-215ENST00000491592 KIF1BO60333 1816 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 NSD3Q9BZ95 1437 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 PPRC1Q5VV67 1664 aaKnown RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 NRXN1Q9ULB1 1477 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CCDC69A6NI79 296 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 A6NLC8 198 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 A6NNZ2 444 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CXorf49A8MYA2 514 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 MUSKO15146 869 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 STARD3NLO95772 234 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 MT-ND3P03897 115 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CSTBP04080 98 aaKnown RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 ALOX12P18054 663 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 ATP5DP30049 168 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 TECP42680 631 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 PHKA1P46020 1223 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 DSC2Q02487 901 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 PTH1RQ03431 593 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 PRKG1Q13976 671 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 RAB39AQ14964 217 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 WTAPQ15007 396 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 SETMARQ53H47 684 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 FAM47AQ5JRC9 791 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 IZUMO3Q5VZ72 239 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 FAM205BPQ63HN1 556 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CCBE1Q6UXH8 406 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 MFSD6Q6ZSS7 791 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 RUFY3Q7L099 469 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 TTC7BQ86TV6 843 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 ELOA2Q8IYF1 753 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 ANKRD35Q8N283 1001 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 ZNF808Q8N4W9 903 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 TTC9BQ8N6N2 239 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 ZMIZ2Q8NF64 920 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 LILRB1Q8NHL6 650 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 ST8SIA2Q92186 375 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 LOXL4Q96JB6 756 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CLPTM1LQ96KA5 538 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 MRGPRX4Q96LA9 322 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 TSGA13Q96PP4 275 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 SLF1Q9BQI6 1058 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 STK31Q9BXU1 1019 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 YY1AP1Q9H869 796 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 RMI1Q9H9A7 625 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 TRPV4Q9HBA0 871 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 PLSCR4Q9NRQ2 329 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 TRMT1Q9NXH9 659 aaKnown RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 DACT1Q9NYF0 836 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 OGFRQ9NZT2 677 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms