RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SAAL1	Q96ER3	474 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PCED1B	Q96HM7	432 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	HPDL	Q96IR7	371 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	UBL7	Q96S82	380 aa	Predicted RBP	20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SIX4	Q9UIU6	781 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	NFE2L3	Q9Y4A8	694 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334		A0A087WV48	116 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TRABD2B	A6NFA1	517 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ZNF883	P0CG24	379 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	WARS	P23381	471 aa	Known RBP	20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	EGFLAM	Q63HQ2	1017 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GRAMD4	Q6IC98	578 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	IL27RA	Q6UWB1	636 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	HS2ST1	Q7LGA3	356 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TMEM25	Q86YD3	366 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PDZD8	Q8NEN9	1154 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	KBTBD7	Q8WVZ9	684 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	DNASE2B	Q8WZ79	361 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ANKRD36BP1	Q96IX9	119 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MRGPRX1	Q96LB2	322 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ACCS	Q96QU6	501 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CD248	Q9HCU0	757 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	HCN2	Q9UL51	889 aa		20.48	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TK2	O00142	265 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	EIF5B	O60841	1220 aa	Known RBP	20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CER1	O95813	267 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GART	P22102	1010 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	YWHAQ	P27348	245 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CD6	P30203	668 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	DDIT3	P35638	169 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GNL1	P36915	607 aa	Predicted RBP	20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	RHBDD1	Q8TEB9	315 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	OVCA2	Q8WZ82	227 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	LARP4B	Q92615	738 aa	Known RBP	20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MMS19	Q96T76	1030 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ACOX2	Q99424	681 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GABRG3	Q99928	467 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	DUSP9	Q99956	384 aa	Known RBP	20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MTMR12	Q9C0I1	747 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GAREM1	Q9H706	876 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MRPL44	Q9H9J2	332 aa	Known RBP	20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PDE11A	Q9HCR9	933 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TM7SF3	Q9NS93	570 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	KIF3A	Q9Y496	699 aa		20.47	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MEI4	A8MW99	385 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	COCH	O43405	550 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PPP1R37	O75864	691 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	RTN3	O95197	1032 aa	Predicted RBP	20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MATK	P42679	507 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	IFRD2	Q12894	506 aa	Predicted RBP	20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MDH1B	Q5I0G3	518 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	HECTD3	Q5T447	861 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SFR1	Q86XK3	245 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	BBS7	Q8IWZ6	715 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	NUP93	Q8N1F7	819 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ZSWIM2	Q8NEG5	633 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CADM4	Q8NFZ8	388 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SCFD1	Q8WVM8	642 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	XPO6	Q96QU8	1125 aa	Known RBP	20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	STRA6	Q9BX79	667 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SNX25	Q9H3E2	840 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	DNAJC17	Q9NVM6	304 aa	Known RBP	20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SEL1L	Q9UBV2	794 aa		20.46	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GOLGA8IP	A6NC78	632 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GOLGA8J	A6NMD2	632 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GFRA2	O00451	464 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TRIM24	O15164	1050 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ATXN1L	P0C7T5	689 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KCNA1	Q09470	495 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SUZ12	Q15022	739 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	L1TD1	Q5T7N2	865 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KIAA1324	Q6UXG2	1013 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DBX2	Q6ZNG2	339 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	METTL3	Q86U44	580 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SYCP3	Q8IZU3	236 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PDCD7	Q8N8D1	485 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	NOC3L	Q8WTT2	800 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	FBXO32	Q969P5	355 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ERLEC1	Q96DZ1	483 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	FAM84A	Q96KN4	292 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ZFR	Q96KR1	1074 aa	Known RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ELOVL4	Q9GZR5	314 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	MIR1-1HG	Q9H1L0	117 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PRDM16	Q9HAZ2	1276 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	INTS13	Q9NVM9	706 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CHORDC1	Q9UHD1	332 aa	Predicted RBP	20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PCDHB13	Q9Y5F0	798 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PCDHGB2	Q9Y5G2	931 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KNTC1	P50748	2209 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PTPRB	P23467	1997 aa		20.45	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KALRN	O60229	2985 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	FLRT2	O43155	660 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CILP	O75339	1184 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DKK1	O94907	266 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TNNC2	P02585	160 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	FAM163B	P0C2L3	166 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DUOXA2	Q1HG44	320 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DYM	Q7RTS9	669 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SLC39A7	Q92504	469 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TOE1	Q96GM8	510 aa	Known RBP	20.44	■□□□□ 0.86

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms