RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 CNGB3Q9NQW8 809 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 UXTQ9UBK9 157 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 NAGPAQ9UK23 515 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 NUDT5Q9UKK9 219 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 REV3LO60673 3130 aa11.31□□□□□ -0.6
CACNA1C-227ENST00000491104 C2orf78A6NCI8 922 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 ZNF263O14978 683 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 MDM4O15151 490 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 RTN2O75298 545 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 ZDHHC11BP0C7U3 371 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 IL9P15248 144 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 ABCB4P21439 1286 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 FSHRP23945 695 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 CDC25CP30307 473 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 MTHFRP42898 656 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 GABRB2P47870 512 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 MRPS5P82675 430 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 TAF5Q15542 800 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 TXNDC8Q6A555 127 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 PM20D1Q6GTS8 502 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 ALKBH5Q6P6C2 394 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 OLFML1Q6UWY5 402 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 MSANTD4Q8NCY6 345 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 SUSD6Q92537 303 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 EDEM1Q92611 657 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 FAM149B1Q96BN6 582 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 ZNF653Q96CK0 615 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 RIPOR3Q96MK2 946 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 METTL5Q9NRN9 209 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 EHD2Q9NZN4 543 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 TRPM5Q9NZQ8 1165 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 HELZP42694 1942 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 NCANO14594 1321 aa11.3□□□□□ -0.6
CACNA1C-227ENST00000491104 NUP210Q8TEM1 1887 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ZNF840PA6NDX5 716 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 FBXO21O94952 628 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 LTFP02788 710 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CALB1P05937 261 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 GZMAP12544 262 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 RRM1P23921 792 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CYLC1P35663 651 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 KCNQ1P51787 676 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CCZ1BP86790 482 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 SLC6A3Q01959 620 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CCDC173Q0VFZ6 552 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 GPR158Q5T848 1215 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 TMTC1Q8IUR5 882 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 SCML4Q8N228 414 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 LEMD2Q8NC56 503 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ACRBPQ8NEB7 543 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 MRPS31Q92665 395 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 MCRS1Q96EZ8 462 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 SLC22A12Q96S37 553 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 MYADMQ96S97 322 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 SMG9Q9H0W8 520 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 TLR8Q9NR97 1041 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 MYO1AQ9UBC5 1043 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 COG5Q9UP83 839 aa11.29□□□□□ -0.6
CACNA1C-227ENST00000491104 TCRBV5S1A1TA0A578 114 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 NDUFA10O95299 355 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 TBX18O95935 607 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 FYNP06241 537 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 RARGP13631 454 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 GALCP54803 685 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 ARHGAP15Q53QZ3 475 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
CACNA1C-227ENST00000491104 EMC1Q8N766 993 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms