RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LIMK1P53667 647 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 KDSRQ06136 332 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 GOLGA8FQ08AF8 430 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 GOLGA8DPQ0D2H9 430 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 CRY1Q16526 586 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 GAB4Q2WGN9 574 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 HSF5Q4G112 596 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 EOGTQ5NDL2 527 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 SNX30Q5VWJ9 437 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 SPOPLQ6IQ16 392 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 INTS8Q75QN2 995 aaKnown RBP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 CRYBG2Q8N1P7 616 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 ALLCQ8N6M5 410 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 SMOQ99835 787 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 SMOC1Q9H4F8 434 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 MMRN2Q9H8L6 949 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 POLMQ9NP87 494 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 IL37Q9NZH6 218 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 BCCIPQ9P287 314 aaKnown RBP eCLIP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 TRAF3IP3Q9Y228 551 aa20.86■□□□□ 0.93
SREBF1-216ENST00000490796 TBC1D3BA6NDS4 549 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 MAPK13O15264 365 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 TLR5O60602 858 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 CAVIN2O95810 425 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 ADRB1P08588 477 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 TNFRSF4P43489 277 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 NDUFA8P51970 172 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 ANO4Q32M45 955 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 PLA2G2CQ5R387 149 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 STPG1Q5TH74 334 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 FAM186BQ8IYM0 893 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 C12orf29Q8N999 325 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 TXNDC5Q8NBS9 432 aaKnown RBP20.85■□□□□ 0.93
SREBF1-216ENST00000490796 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 CNOT6LQ96LI5 555 aaKnown RBP20.85■□□□□ 0.93
SREBF1-216ENST00000490796 NT5C1AQ9BXI3 368 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 SCAND2PQ9GZW5 306 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-216ENST00000490796 HMGXB4Q9UGU5 601 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 MAPK8IP1Q9UQF2 711 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 MYH10P35580 1976 aa20.85■□□□□ 0.93
SREBF1-216ENST00000490796 RHOBTB3O94955 611 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 PRR29P0C7W0 189 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 PSMC2P35998 433 aaKnown RBP20.84■□□□□ 0.93
SREBF1-216ENST00000490796 ASPAP45381 313 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 GCLMP48507 274 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 RNF43Q68DV7 783 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 C12orf40Q86WS4 652 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 PGBD3Q8N328 593 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 NAT16Q8N8M0 369 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 ZFRQ96KR1 1074 aaKnown RBP20.84■□□□□ 0.93
SREBF1-216ENST00000490796 SPACA7Q96KW9 195 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 CYP3A43Q9HB55 503 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 CSNK1G1Q9HCP0 422 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 DEC1Q9P2X7 70 aa20.84■□□□□ 0.93
SREBF1-216ENST00000490796 LSM7Q9UK45 103 aaKnown RBP20.84■□□□□ 0.93
SREBF1-216ENST00000490796 MYOFQ9NZM1 2061 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 FAM92AA1XBS5 289 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 MAP3K13O43283 966 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 BEST1O76090 585 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 ZDHHC11BP0C7U3 371 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 TRIM49P0CI25 452 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 TRIM49CP0CI26 452 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 CD58P19256 250 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 ADAM9Q13443 819 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 KRBA2Q6ZNG9 492 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 TRMT11Q7Z4G4 463 aaKnown RBP20.83■□□□□ 0.93
SREBF1-216ENST00000490796 RASSF3Q86WH2 238 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 BBS7Q8IWZ6 715 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 GUF1Q8N442 669 aaKnown RBP20.83■□□□□ 0.93
SREBF1-216ENST00000490796 IL17RCQ8NAC3 791 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 ZMIZ2Q8NF64 920 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 WHAMMQ8TF30 809 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 CYFIP2Q96F07 1278 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 CNTNAP3BQ96NU0 1288 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 HNRNPABQ99729 332 aaKnown RBP20.83■□□□□ 0.93
SREBF1-216ENST00000490796 CNTNAP3Q9BZ76 1288 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 SPHK2Q9NRA0 654 aa20.83■□□□□ 0.93
SREBF1-216ENST00000490796 EPG5Q9HCE0 2579 aa20.83■□□□□ 0.92
SREBF1-216ENST00000490796 BCLAF3A2AJT9 711 aaKnown RBP20.82■□□□□ 0.92
SREBF1-216ENST00000490796 ACO1P21399 889 aaKnown RBP20.82■□□□□ 0.92
SREBF1-216ENST00000490796 ATP5C1P36542 298 aaKnown RBP20.82■□□□□ 0.92
SREBF1-216ENST00000490796 DHPSP49366 369 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-216ENST00000490796 DPYDQ12882 1025 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 BYSLQ13895 437 aaKnown RBP20.82■□□□□ 0.92
SREBF1-216ENST00000490796 NFIL3Q16649 462 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 EMC10Q5UCC4 262 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 CYP2U1Q7Z449 544 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 MDGA1Q8NFP4 955 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 TAS1R2Q8TE23 839 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 CHAMP1Q96JM3 812 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 NIF3L1Q9GZT8 377 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 RXFP3Q9NSD7 469 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 EML5Q05BV3 1969 aa20.82■□□□□ 0.92
SREBF1-216ENST00000490796 MYO16Q9Y6X6 1858 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 ABCA7Q8IZY2 2146 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 CACNA1BQ00975 2339 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 FAM237AA0A1B0GTK4 181 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 A0A1W2PQ27 194 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 A0A1W2PQ64 194 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 A0A1W2PQD8 194 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms