RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 DNAH14Q0VDD8 3507 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 SH3BP5O60239 455 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 PRSS23O95084 383 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 ALDH9A1P49189 494 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 CHN2P52757 468 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 BIRC3Q13489 604 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 BLMHQ13867 455 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 CSRP2Q16527 193 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 TMEM95Q3KNT9 176 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 AMOTQ4VCS5 1084 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 PDPRQ8NCN5 879 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 OR10H5Q8NGA6 315 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 ST8SIA2Q92186 375 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 SCAMP4Q969E2 229 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 LTV1Q96GA3 475 aaPredicted RBP5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 CPEB1Q9BZB8 566 aaKnown RBP5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 CHST8Q9H2A9 424 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 LRFN1Q9P244 771 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 XPR1Q9UBH6 696 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 SLC39A10Q9ULF5 831 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 CDYLQ9Y232 598 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 ZNF536O15090 1300 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 MAP3K19Q56UN5 1328 aa5.69□□□□□ -1.5
SSX2IP-208ENST00000490476 KIF24Q5T7B8 1368 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 BPTFQ12830 3046 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 DMXL1Q9Y485 3027 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 ADM5C9JUS6 153 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 PLA2G6O60733 806 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 MFAP3LO75121 409 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 ANXA1P04083 346 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 PIM1P11309 404 aaPredicted RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 IL1R1P14778 569 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 CHRM3P20309 590 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 KLRC1P26715 233 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 MSX2P35548 267 aaPredicted RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 RPS19P39019 145 aaKnown RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 RENBPP51606 427 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 NOMO2Q5JPE7 1267 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 MFSD5Q6N075 450 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 ZDHHC24Q6UX98 284 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 DOK3Q7L591 496 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 D2HGDHQ8N465 521 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 NKAPQ8N5F7 415 aaKnown RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 ATG16L2Q8NAA4 619 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 SPATA5Q8NB90 893 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 NSUN7Q8NE18 718 aaKnown RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 HEPHQ9BQS7 1158 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 TTYH3Q9C0H2 523 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 SEC61A2Q9H9S3 476 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 MID2Q9UJV3 735 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 ASAP1Q9ULH1 1129 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 SH3BP1Q9Y3L3 701 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 CDHR2Q9BYE9 1310 aa5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 DDX60LQ5H9U9 1706 aaKnown RBP5.68□□□□□ -1.5
SSX2IP-208ENST00000490476 COL15A1P39059 1388 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 HELZ2Q9BYK8 2649 aaKnown RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 MYO15AQ9UKN7 3530 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 A0A087WWL8 130 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 DRGXA6NNA5 263 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 E9PLN8 166 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 RAB27BO00194 218 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 PODXLO00592 558 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 LAMTOR5O43504 91 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SKAP2O75563 359 aaPredicted RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 NDST3O95803 873 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 FGAP02671 866 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 CSTBP04080 98 aaKnown RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 GRK6P43250 576 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SP3Q02447 781 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 FAM160B1Q5W0V3 765 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SLC30A10Q6XR72 485 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 GPRIN1Q7Z2K8 1008 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 YAF2Q8IY57 180 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SDR16C5Q8N3Y7 309 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 FANCBQ8NB91 859 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 CCDC150Q8NCX0 1101 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 IPCEF1Q8WWN9 437 aaPredicted RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SPSB4Q96A44 273 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 VKORC1Q9BQB6 163 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 STK33Q9BYT3 514 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 MYLK2Q9H1R3 596 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 AS3MTQ9HBK9 375 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 OBP2BQ9NPH6 170 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 ANKRD17O75179 2603 aaKnown RBP5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 FAM205AQ6ZU69 1335 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 PTPN13Q12923 2485 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 LTBP2Q14767 1821 aa5.67□□□□□ -1.5
SSX2IP-208ENST00000490476 FAM234BA2RU67 622 aa5.66□□□□□ -1.5
SSX2IP-208ENST00000490476 PI4K2BG5E9Z4 385 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms