RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ARHGAP17Q68EM7 881 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 GPRIN1Q7Z2K8 1008 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 CDK5RAP1Q96SZ6 601 aaKnown RBP18.4■□□□□ 0.54
SEC13-218ENST00000490283 EPC1Q9H2F5 836 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 NCDNQ9UBB6 729 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 HESX1Q9UBX0 185 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 ANAPC1Q9H1A4 1944 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 HHLA1C9JL84 531 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 SCAMP3O14828 347 aaKnown RBP18.39■□□□□ 0.53
SEC13-218ENST00000490283 CYP17A1P05093 508 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 IRF1P10914 325 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 RALAP11233 206 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 TDGF1P13385 188 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 CD19P15391 556 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 KIF11P52732 1056 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 DHCR24Q15392 516 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 SGO2Q562F6 1265 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 LONP2Q86WA8 852 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 ADGRG2Q8IZP9 1017 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 ARHGAP18Q8N392 663 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 ACDQ96AP0 544 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 SRRTQ9BXP5 876 aaKnown RBP18.39■□□□□ 0.53
SEC13-218ENST00000490283 CYLDQ9NQC7 956 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SEC13-218ENST00000490283 LSM7Q9UK45 103 aaKnown RBP18.39■□□□□ 0.53
SEC13-218ENST00000490283 SMG5Q9UPR3 1016 aaKnown RBP18.39■□□□□ 0.53
SEC13-218ENST00000490283 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
SEC13-218ENST00000490283 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.38■□□□□ 0.53
SEC13-218ENST00000490283 ADH5P11766 374 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 RARGP13631 454 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 CNR2P34972 360 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 BCAT1P54687 386 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 GOLGA7BQ2TAP0 167 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 C10orf120Q5SQS8 335 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 BTBD8Q5XKL5 378 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 HEATR6Q6AI08 1181 aaKnown RBP18.38■□□□□ 0.53
SEC13-218ENST00000490283 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 PPM1KQ8N3J5 372 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 ANKRD52Q8NB46 1076 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 SUMF1Q8NBK3 374 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 FBRSL1Q9HCM7 1045 aaKnown RBP18.38■□□□□ 0.53
SEC13-218ENST00000490283 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
SEC13-218ENST00000490283 A0A1W2PQH9 124 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 CHURC1-FNTBB4DL54 471 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 K7ESF4 209 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 VDRP11473 427 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 HOXA6P31267 233 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 EIF2DP41214 584 aaKnown RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 FNTBP49356 437 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 GAD2Q05329 585 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 PREPLQ4J6C6 727 aaPredicted RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 NAIF1Q69YI7 327 aaPredicted RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 KLHDC10Q6PID8 442 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 PRR23BQ6ZRT6 265 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 RPLP0P6Q8NHW5 317 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 ZFRQ96KR1 1074 aaKnown RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 DNMT3LQ9UJW3 386 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 GMEB2Q9UKD1 530 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 TSPAN16Q9UKR8 245 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
SEC13-218ENST00000490283 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 PTPRZ1P23471 2315 aaPredicted RBP18.37■□□□□ 0.53
SEC13-218ENST00000490283 TBX18O95935 607 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 APODP05090 189 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 PAEPP09466 180 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
SEC13-218ENST00000490283 BST2Q10589 180 aaKnown RBP18.36■□□□□ 0.53
SEC13-218ENST00000490283 KCNH2Q12809 1159 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 TPD52L1Q16890 204 aaPredicted RBP18.36■□□□□ 0.53
SEC13-218ENST00000490283 TMEM270Q6UE05 265 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 NUDT18Q6ZVK8 323 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 PIGZQ86VD9 579 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 CREBRFQ8IUR6 639 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 PNKPQ96T60 521 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 LRRC4Q9HBW1 653 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
SEC13-218ENST00000490283 CLIC5Q9NZA1 410 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 USP3Q9Y6I4 520 aa18.36■□□□□ 0.53
SEC13-218ENST00000490283 XPO1O14980 1071 aaKnown RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 OPRD1P41143 372 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 PLA2G4AP47712 749 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 SIM2Q14190 667 aaPredicted RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 ANO4Q32M45 955 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 LY6G5CQ5SRR4 150 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 PKN3Q6P5Z2 889 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 RHBDF2Q6PJF5 856 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 CEP68Q76N32 757 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 RSRC2Q7L4I2 434 aaKnown RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 WDR5BQ86VZ2 330 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 BBS7Q8IWZ6 715 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 CAMKK1Q8N5S9 505 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 MLKLQ8NB16 471 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 KLF16Q9BXK1 252 aaPredicted RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 NMUR1Q9HB89 426 aa18.35■□□□□ 0.53
SEC13-218ENST00000490283 OSER1Q9NX31 292 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms