RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CCDC192P0DO97 292 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 HNRNPLP14866 589 aaKnown RBP eCLIP20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ADAM9Q13443 819 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CCDC6Q16204 474 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CLEC20AQ6ZU45 233 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 FAM186BQ8IYM0 893 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SMYD4Q8IYR2 804 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 NETO1Q8TDF5 533 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ACDQ96AP0 544 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 RXFP3Q9NSD7 469 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ABCA7Q8IZY2 2146 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TBX18O95935 607 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ZNF806P0C7X5 589 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PSMC2P35998 433 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 EIF2DP41214 584 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SF3A2Q15428 464 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 LY6G5CQ5SRR4 150 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 EMC10Q5UCC4 262 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 RASSF3Q86WH2 238 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 BBS7Q8IWZ6 715 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ETFBKMTQ8IXQ9 262 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SEMA4DQ92854 862 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 EEF2KMTQ96G04 330 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PNKPQ96T60 521 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TBC1D14Q9P2M4 693 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 MMP17Q9ULZ9 603 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ATP6V1DQ9Y5K8 247 aa20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 MYO18AQ92614 2054 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CILPO75339 1184 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 KAT7O95251 611 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ADH5P11766 374 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ADORA2BP29275 332 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 KIR2DL1P43626 348 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TMEM92Q6UXU6 159 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 FMR1NBQ8N0W7 255 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CCDC33Q8N5R6 958 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 IL17RCQ8NAC3 791 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CCDC47Q96A33 483 aaKnown RBP20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 OTUB2Q96DC9 234 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CYFIP2Q96F07 1278 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 KLF16Q9BXK1 252 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 FBXO44Q9H4M3 255 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TMEM8AQ9HCN3 771 aa20.52■□□□□ 0.88
TNFRSF1B-202ENST00000489921 NUP205Q92621 2012 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TLR5O60602 858 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ADH1CP00326 375 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 FAM200BP0CF97 657 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 RPL13P26373 211 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MRPS21P82921 87 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PNOCQ13519 176 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CRY1Q16526 586 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 EDRF1Q3B7T1 1238 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TMEM25Q86YD3 366 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CCDC26Q8TAB7 109 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NT5C1AQ9BXI3 368 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NIF3L1Q9GZT8 377 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SMOC1Q9H4F8 434 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NMUR1Q9HB89 426 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CYLDQ9NQC7 956 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 HCN2Q9UL51 889 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SCML2Q9UQR0 700 aa20.51■□□□□ 0.87
TNFRSF1B-202ENST00000489921 THADAQ6YHU6 1953 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SGK1O00141 431 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TM4SF5O14894 197 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CYP26A1O43174 497 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KRT13P13646 458 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CD58P19256 250 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 DGKEP52429 567 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 HTR3DQ70Z44 454 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ALLCQ8N6M5 410 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ENGASEQ8NFI3 743 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TSTD1Q8NFU3 115 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TPSD1Q9BZJ3 242 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PNPLA8Q9NP80 782 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TLR8Q9NR97 1041 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SPHK2Q9NRA0 654 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 INVSQ9Y283 1065 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PCDHGA5Q9Y5G8 931 aa20.5■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TRIM24O15164 1050 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 HOXC11O43248 304 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 FOXD2O60548 495 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ADAM23O75077 832 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 GTF2H1P32780 548 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TIE1P35590 1138 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 GRIA2P42262 883 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TNFRSF4P43489 277 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 GAD2Q05329 585 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KDSRQ06136 332 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PPP1R26Q5T8A7 1209 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KRT39Q6A163 491 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NAT16Q8N8M0 369 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TXNDC5Q8NBS9 432 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MDGA1Q8NFP4 955 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CNOT6LQ96LI5 555 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 IMPG2Q9BZV3 1241 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ZDHHC4Q9NPG8 344 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ARHGEF4Q9NR80 690 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms