RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CETN1Q12798 172 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 PPP1R26Q5T8A7 1209 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 ISM2Q6H9L7 571 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 TADA2BQ86TJ2 420 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 WDR5BQ86VZ2 330 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 CAMKK1Q8N5S9 505 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 JAKMIP2Q96AA8 810 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 ZFRQ96KR1 1074 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 HEXIM2Q96MH2 286 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 CYLDQ9NQC7 956 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 MYOFQ9NZM1 2061 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 FRYLO94915 3013 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 OTOGLQ3ZCN5 2332 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 RALGAPA1Q6GYQ0 2036 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 HHLA1C9JL84 531 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 CYP26A1O43174 497 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 ADH5P11766 374 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 ATP5C1P36542 298 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 CUL2Q13617 745 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 MORC3Q14149 939 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 SIM2Q14190 667 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 DHCR24Q15392 516 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 PREPLQ4J6C6 727 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 ARHGAP17Q68EM7 881 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 LAIR1Q6GTX8 287 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 KLHL10Q6JEL2 608 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 PRR23BQ6ZRT6 265 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 SYT13Q7L8C5 426 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 GPRIN1Q7Z2K8 1008 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 CCDC186Q7Z3E2 898 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 ADGRG2Q8IZP9 1017 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 TRIML1Q8N9V2 468 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 SLC4A11Q8NBS3 891 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 RPLP0P6Q8NHW5 317 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 NELFBQ8WX92 580 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 CDK5RAP1Q96SZ6 601 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 ARID3AQ99856 593 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 FBRSL1Q9HCM7 1045 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 LSM7Q9UK45 103 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
SPTLC1-207ENST00000488921 GVINP1Q7Z2Y8 2422 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 ZNF292O60281 2723 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 PMM2O15305 246 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 GADD45BO75293 160 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 GNA14O95837 355 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 OPRD1P41143 372 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 FMO5P49326 533 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 KIF11P52732 1056 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 RAD23BP54727 409 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 UBE2HP62256 183 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 GAD2Q05329 585 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 DMWDQ09019 674 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 PAK1Q13153 545 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 BTBD8Q5XKL5 378 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 NAIF1Q69YI7 327 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 TTI2Q6NXR4 508 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 PKN3Q6P5Z2 889 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 KLHDC10Q6PID8 442 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 KIAA2013Q8IYS2 634 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 TATDN2Q93075 761 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 PNKPQ96T60 521 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 C2orf42Q9NWW7 574 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 NAGPAQ9UK23 515 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 SPAG17Q6Q759 2223 aa14.55□□□□□ -0.08
SPTLC1-207ENST00000488921 PPP1R3GB7ZBB8 358 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 BIN1O00499 593 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 SCAMP3O14828 347 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 P4HA2O15460 535 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 FGFR1OPO95684 399 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 APODP05090 189 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 IRF1P10914 325 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 RALAP11233 206 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 ID4P47928 161 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 BCAT1P54687 386 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 GAB4Q2WGN9 574 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 RHBDF2Q6PJF5 856 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 CEP68Q76N32 757 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 ZNF276Q8N554 614 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 DCLK2Q8N568 766 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 ANKRD52Q8NB46 1076 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 NT5C1BQ96P26 610 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 HESX1Q9UBX0 185 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 DNMT3LQ9UJW3 386 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 USP3Q9Y6I4 520 aa14.54□□□□□ -0.08
SPTLC1-207ENST00000488921 A0A1W2PQH9 124 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 HOXC11O43248 304 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 LRP3O75074 770 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 APBB3O95704 486 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 RARGP13631 454 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 BMP6P22004 513 aa14.53□□□□□ -0.08
SPTLC1-207ENST00000488921 MRPS21P82921 87 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms