RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 TMC8Q8IU68 726 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 ZDHHC17Q8IUH5 632 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 ARHGEF26Q96DR7 871 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 TRMT2BQ96GJ1 504 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 TTLL2Q9BWV7 592 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 USP3Q9Y6I4 520 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 YJEFN3A6XGL0 299 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 E7ENQ6 273 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TADA3O75528 432 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 LTFP02788 710 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 CCDC175P0C221 793 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TMEM253P0C7T8 217 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 GJA1P17302 382 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 PTPN2P17706 415 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 VAV2P52735 878 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 GPC5P78333 572 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 CYP4F8P98187 520 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 SLC6A3Q01959 620 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 ZNF268Q14587 947 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TAF5Q15542 800 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 PABPC1LQ4VXU2 614 aaKnown RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 BTBD8Q5XKL5 378 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 HFE2Q6ZVN8 426 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 BHLHA9Q7RTU4 235 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 C3orf20Q8ND61 904 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 PDZD8Q8NEN9 1154 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 EDEM1Q92611 657 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 MCRS1Q96EZ8 462 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 MCEEQ96PE7 176 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TRPC7Q9HCX4 862 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
TRAIP-209ENST00000488860 CDH22Q9UJ99 828 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
TRAIP-209ENST00000488860 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 A0A1W2PRU2 124 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 CAPN9O14815 690 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 HSF2BPO75031 334 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 DAB1O75553 588 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 POU2F2P09086 479 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 HOXB8P17481 243 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-209ENST00000488860 CDC25CP30307 473 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 PM20D1Q6GTS8 502 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 DCUN1D2Q6PH85 259 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 RSRC2Q7L4I2 434 aaKnown RBP12.91□□□□□ -0.34
TRAIP-209ENST00000488860 GET4Q7L5D6 327 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-209ENST00000488860 SCML4Q8N228 414 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 EMC1Q8N766 993 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 ING5Q8WYH8 240 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 OVCA2Q8WZ82 227 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 TCEAL4Q96EI5 215 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 ATXN3LQ9H3M9 355 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 NMUR1Q9HB89 426 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 IL21Q9HBE4 155 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 AVENQ9NQS1 362 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-209ENST00000488860 PARVAQ9NVD7 372 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 IL37Q9NZH6 218 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 CTTNBP2NLQ9P2B4 639 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 PYCARDQ9ULZ3 195 aa12.91□□□□□ -0.34
TRAIP-209ENST00000488860 A0A0U1RQJ8 604 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 RCCD1A6NED2 376 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 H3BQ06 376 aaPredicted RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 FGF19O95750 216 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 CYP1A2P05177 515 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 RALAP11233 206 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 KRT3P12035 628 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 NCAM1P13591 858 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 LTBRP36941 435 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 CCR2P41597 374 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 PGFP49763 221 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 SLC5A9Q2M3M2 681 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 BSPRYQ5W0U4 402 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 SCD5Q86SK9 330 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 MON1AQ86VX9 555 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms