RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 GOLGA6L4A6NEF3 574 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 PRR5-ARHGAP8B1AHC4 643 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 CETN3O15182 167 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 TLR5O60602 858 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 CHRM1P11229 460 aaPredicted RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 TRIM21P19474 475 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 MXI1P50539 228 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 PMS1P54277 932 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 SEC13P55735 322 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 ARHGAP8P85298 464 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 ZC3H3Q8IXZ2 948 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 JAKMIP2Q96AA8 810 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 OTUB2Q96DC9 234 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 DUSP9Q99956 384 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 TLR8Q9NR97 1041 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 SEMA4GQ9NTN9 838 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 OSER1Q9NX31 292 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 SCML2Q9UQR0 700 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 PCDHA5Q9Y5H7 936 aa20.42■□□□□ 0.86
CD55-209ENST00000488171 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.42■□□□□ 0.86
CD55-209ENST00000488171 AXIN1O15169 862 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 CYP26A1O43174 497 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 ADH1CP00326 375 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 ADH5P11766 374 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 EIF2DP41214 584 aaKnown RBP20.41■□□□□ 0.86
CD55-209ENST00000488171 CSRP2Q16527 193 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 C2orf27AQ580R0 203 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 LY6G5CQ5SRR4 150 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 PPP1R26Q5T8A7 1209 aaPredicted RBP20.41■□□□□ 0.86
CD55-209ENST00000488171 KBTBD6Q86V97 674 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 BBS7Q8IWZ6 715 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 FBXL13Q8NEE6 735 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 CCDC26Q8TAB7 109 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 FAXDC2Q96IV6 333 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 PNKPQ96T60 521 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 PNPLA8Q9NP80 782 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 RAB20Q9NX57 234 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 EBF1Q9UH73 591 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 SH3BP1Q9Y3L3 701 aa20.41■□□□□ 0.86
CD55-209ENST00000488171 CEP250Q9BV73 2442 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 GREM1O60565 184 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 APBB3O95704 486 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 TBX18O95935 607 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 CCDC192P0DO97 292 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 ACO1P21399 889 aaKnown RBP20.4■□□□□ 0.86
CD55-209ENST00000488171 SDHBP21912 280 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 ZNF394Q53GI3 561 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 ANKRD40Q6AI12 368 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 CACNA2D4Q7Z3S7 1137 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 TIGD1Q96MW7 591 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 ARID3AQ99856 593 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 NACA2Q9H009 215 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 NMUR1Q9HB89 426 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 CYLDQ9NQC7 956 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 MYOFQ9NZM1 2061 aa20.4■□□□□ 0.86
CD55-209ENST00000488171 CACNA1AO00555 2505 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 A0A0A0MRY4 1105 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 MED19A0JLT2 244 aaPredicted RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 SLC16A3O15427 465 aaKnown RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 STX10O60499 249 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 KAT7O95251 611 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 SMC2O95347 1197 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 IRF1P10914 325 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 ATXN1P54253 815 aaKnown RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 CBWD6Q4V339 395 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 CBWD3Q5JTY5 395 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 CBWD5Q5RIA9 395 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 PRR23CQ6ZRP0 262 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 PHTF2Q8N3S3 785 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 TATDN2Q93075 761 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 SMARCE1Q969G3 411 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 LOXL4Q96JB6 756 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 ZC3H10Q96K80 434 aaKnown RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 KLF16Q9BXK1 252 aaPredicted RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 DUSP16Q9BY84 665 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 CISHQ9NSE2 258 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 CDV3Q9UKY7 258 aaKnown RBP20.39■□□□□ 0.85
CD55-209ENST00000488171 MMP17Q9ULZ9 603 aa20.39■□□□□ 0.85
CD55-209ENST00000488171 A0A1W2PQH9 124 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 TRIM49BA6NDI0 452 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 HOXC11O43248 304 aaPredicted RBP20.38■□□□□ 0.85
CD55-209ENST00000488171 KIF11P52732 1056 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 MRPS21P82921 87 aaKnown RBP20.38■□□□□ 0.85
CD55-209ENST00000488171 FKBP3Q00688 224 aaKnown RBP20.38■□□□□ 0.85
CD55-209ENST00000488171 GAD2Q05329 585 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 ETFBKMTQ8IXQ9 262 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 CCDC33Q8N5R6 958 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 SLC4A11Q8NBS3 891 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 HEXIM2Q96MH2 286 aaKnown RBP20.38■□□□□ 0.85
CD55-209ENST00000488171 TSG101Q99816 390 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 ARHGEF4Q9NR80 690 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 SPHK2Q9NRA0 654 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 COQ4Q9Y3A0 265 aa20.38■□□□□ 0.85
CD55-209ENST00000488171 EPN2O95208 641 aa20.37■□□□□ 0.85
CD55-209ENST00000488171 APODP05090 189 aa20.37■□□□□ 0.85
CD55-209ENST00000488171 ATP5C1P36542 298 aaKnown RBP20.37■□□□□ 0.85
CD55-209ENST00000488171 GRIA2P42262 883 aa20.37■□□□□ 0.85
CD55-209ENST00000488171 RAD23BP54727 409 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms