RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KANSL1Q7Z3B3 1105 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RBM23Q86U06 439 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RHPN2Q8IUC4 686 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CCDC83Q8IWF9 413 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RAVER1Q8IY67 606 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 KIAA2013Q8IYS2 634 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 IGSF22Q8N9C0 903 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FSIP1Q8NA03 581 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RNF149Q8NC42 400 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 DEPTORQ8TB45 409 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 USP33Q8TEY7 942 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GOLGA1Q92805 767 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FGF14Q92915 247 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 AZIN2Q96A70 460 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 ACAP3Q96P50 834 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GAD1Q99259 594 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GPR62Q9BZJ7 368 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CLEC4MQ9H2X3 399 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CUEDC2Q9H467 287 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PRORYQ9H606 182 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GCNT4Q9P109 453 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 DNAJB4Q9UDY4 337 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FBXO10Q9UK96 956 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PILRBQ9UKJ0 227 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 EXOC7Q9UPT5 735 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC27A6Q9Y2P4 619 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TRAV19A0A0A6YYK7 116 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TMX2-CTNND1H3BSU7 103 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CAPN9O14815 690 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 DDX3YO15523 660 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 NEMFO60524 1076 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 MAGEC1O60732 1142 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RNGTTO60942 597 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 BPNT1O95861 308 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 ASGR2P07307 311 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PLS3P13797 630 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PCSK1P29120 753 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 ATICP31939 592 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 MLH1P40692 756 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SCNN1GP51170 649 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 AK2P54819 239 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 AMPD3Q01432 767 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 OVGP1Q12889 678 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RUNX3Q13761 415 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 UBXN2BQ14CS0 331 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CALCRLQ16602 461 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 XKR9Q5GH70 373 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 C20orf194Q5TEA3 1177 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 NT5DC1Q5TFE4 455 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SAMD5Q5TGI4 173 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 YOD1Q5VVQ6 348 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FSTL4Q6MZW2 842 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 C4orf50Q6ZRC1 276 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CEP68Q76N32 757 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GRASPQ7Z6J2 395 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM173Q86WV6 379 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 JAMLQ86YT9 394 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SLITRK4Q8IW52 837 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 LSMEM2Q8N112 164 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SDR16C5Q8N3Y7 309 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC7A14Q8TBB6 771 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CACTINQ8WUQ7 758 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TRAPPC12Q8WVT3 735 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 NXPE2Q96DL1 559 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 DPH1Q9BZG8 443 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CD248Q9HCU0 757 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDH12Q9NPG4 1184 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 NDFIP2Q9NV92 336 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 USP36Q9P275 1121 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 WDR35Q9P2L0 1181 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PPM1HQ9ULR3 514 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GPC6Q9Y625 555 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CITO14578 2027 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CEP290O15078 2479 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 NYNRINQ9P2P1 1898 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 EML5Q05BV3 1969 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SMIM28A0A1B0GU29 152 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 MTMR11A4FU01 709 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC35F4A4IF30 521 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GABRDO14764 452 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 OGTO15294 1046 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PDPK1O15530 556 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 B4GALT3O60512 393 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ASMTLO95671 621 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CAVIN2O95810 425 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TRIM21P19474 475 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 HSD3B2P26439 372 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CDC27P30260 824 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GRIA2P42262 883 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CCR5P51681 352 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 INHBCP55103 352 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 OXCT1P55809 520 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 NLRP12P59046 1061 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 E2F1Q01094 437 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SATB1Q01826 763 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GSTM4Q03013 218 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PPP2R3AQ06190 1150 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF252P-AS1Q0IIN9 211 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 DMP1Q13316 513 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 DMC1Q14565 340 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms