RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 SGK1O00141 431 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 RHOBTB3O94955 611 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 KLF8O95600 359 aaPredicted RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 CAVIN2O95810 425 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TBX18O95935 607 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 APODP05090 189 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 GBP1P32455 592 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TIE1P35590 1138 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 GRIA2P42262 883 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TNFRSF4P43489 277 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 TUBP50607 506 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 CREB5Q02930 508 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 GAD2Q05329 585 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TCEAL6Q6IPX3 200 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TTC30AQ86WT1 665 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 NAT16Q8N8M0 369 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 TXNDC5Q8NBS9 432 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 TCEAL3Q969E4 200 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 TWNKQ96RR1 684 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 ZDHHC4Q9NPG8 344 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 FAM49BQ9NUQ9 324 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
VPS16-208ENST00000487461 HELZP42694 1942 aaKnown RBP12.91□□□□□ -0.34
VPS16-208ENST00000487461 HHLA1C9JL84 531 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 MAPK13O15264 365 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 GREM1O60565 184 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 TLR5O60602 858 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 ADAM23O75077 832 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 IRF1P10914 325 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 BCKDHBP21953 392 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 ADORA2BP29275 332 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 PIK3CAP42336 1068 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 GCLMP48507 274 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 KRT85P78386 507 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 KDSRQ06136 332 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 DPYDQ12882 1025 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 NFIL3Q16649 462 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 PMS2CLQ68D20 193 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 ETFBKMTQ8IXQ9 262 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 MDGA1Q8NFP4 955 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 OLIG1Q8TAK6 271 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 WHAMMQ8TF30 809 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 DDX1Q92499 740 aaKnown RBP12.9□□□□□ -0.34
VPS16-208ENST00000487461 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
VPS16-208ENST00000487461 KLF16Q9BXK1 252 aaPredicted RBP12.9□□□□□ -0.34
VPS16-208ENST00000487461 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 MYO16Q9Y6X6 1858 aa12.9□□□□□ -0.34
VPS16-208ENST00000487461 ACACBO00763 2458 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 TBC1D3BA6NDS4 549 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 TRIM24O15164 1050 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 TULP3O75386 442 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 KCNA4P22459 653 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 NR2F2P24468 414 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 INCA1Q0VD86 236 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 ADAM9Q13443 819 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 HSF5Q4G112 596 aaPredicted RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 CLEC20AQ6ZU45 233 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 TAS1R2Q8TE23 839 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 JAKMIP2Q96AA8 810 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 NACA2Q9H009 215 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
VPS16-208ENST00000487461 HCN2Q9UL51 889 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
VPS16-208ENST00000487461 KIAA1549LQ6ZVL6 1849 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms