RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 CUL2Q13617 745 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-229ENST00000487427 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 OTUB2Q96DC9 234 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
ITSN1-229ENST00000487427 ARID3AQ99856 593 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 NACA2Q9H009 215 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 C2orf42Q9NWW7 574 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 USP34Q70CQ2 3546 aa13.14□□□□□ -0.31
ITSN1-229ENST00000487427 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 TLR5O60602 858 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 ADH1CP00326 375 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 CYP17A1P05093 508 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 CNR2P34972 360 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 ATP5C1P36542 298 aaKnown RBP13.13□□□□□ -0.31
ITSN1-229ENST00000487427 FMO5P49326 533 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 PGFP49763 221 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
ITSN1-229ENST00000487427 CETN1Q12798 172 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 DHCR24Q15392 516 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 ARHGAP17Q68EM7 881 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 JAKMIP2Q96AA8 810 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 PTPRDP23468 1912 aa13.13□□□□□ -0.31
ITSN1-229ENST00000487427 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 SCAMP3O14828 347 aaKnown RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 P4HA2O15460 535 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 CYP26A1O43174 497 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 HRO43593 1189 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 RNF40O75150 1001 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 GNA14O95837 355 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 TBX18O95935 607 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 TBXAS1P24557 533 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 OPRD1P41143 372 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 FNTBP49356 437 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 SLC8A3P57103 927 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 DMWDQ09019 674 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 PAK1Q13153 545 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 HEATR6Q6AI08 1181 aaKnown RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 HINFPQ9BQA5 517 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
ITSN1-229ENST00000487427 SLC8A2Q9UPR5 921 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 OTOGLQ3ZCN5 2332 aa13.12□□□□□ -0.31
ITSN1-229ENST00000487427 ZNF292O60281 2723 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 CCDC163A0A0D9SF12 145 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 A0A1W2PQH9 124 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
ITSN1-229ENST00000487427 RARGP13631 454 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
ITSN1-229ENST00000487427 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 STX17P56962 302 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 LRMPQ12912 555 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 CAMK4Q16566 473 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 SCD5Q86SK9 330 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 WDR5BQ86VZ2 330 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 CAMKK1Q8N5S9 505 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
ITSN1-229ENST00000487427 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
ITSN1-229ENST00000487427 NMUR1Q9HB89 426 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
ITSN1-229ENST00000487427 OSER1Q9NX31 292 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 CLIC5Q9NZA1 410 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 DNMT3LQ9UJW3 386 aa13.11□□□□□ -0.31
ITSN1-229ENST00000487427 OBSL1O75147 1896 aa13.1□□□□□ -0.31
ITSN1-229ENST00000487427 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
ITSN1-229ENST00000487427 A0A0A0MRY4 1105 aa13.1□□□□□ -0.31
ITSN1-229ENST00000487427 K7EQS6 105 aa13.1□□□□□ -0.31
ITSN1-229ENST00000487427 RALAP11233 206 aa13.1□□□□□ -0.31
ITSN1-229ENST00000487427 VDRP11473 427 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms