RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PRG3Q9Y2Y8 225 aaPredicted RBP15.3■□□□□ 0.04
POLR2J3-204ENST00000486319 NR2E1Q9Y466 385 aa15.3■□□□□ 0.04
POLR2J3-204ENST00000486319 B3GAT3O94766 335 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 CXCL14O95715 111 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 KRT7P08729 469 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 DESP17661 470 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 GPD1P21695 349 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 CA8P35219 290 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 SCNN1AP37088 669 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 RPL34P49207 117 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 KCNQ1P51787 676 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 COPS2P61201 443 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 MRPS25P82663 173 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 SLC6A3Q01959 620 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 CTC1Q2NKJ3 1217 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 ODF2Q5BJF6 829 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 DAB2IPQ5VWQ8 1189 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 HDXQ7Z353 690 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 METTL23Q86XA0 190 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 PRELID2Q8N945 189 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 MRPL43Q8N983 215 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 C12orf50Q8NA57 414 aaPredicted RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 C3orf58Q8NDZ4 430 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 CDH9Q9ULB4 789 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 KIAA1671Q9BY89 1806 aa15.29■□□□□ 0.04
POLR2J3-204ENST00000486319 FAM187AA6NFU0 413 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 HIDE1A8MVS5 230 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 H3BQ06 376 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 TULP2O00295 520 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 XPO1O14980 1071 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 PCSK1P29120 753 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 GJC1P36383 396 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 ZNF143P52747 638 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 DR1Q01658 176 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 ADAM15Q13444 863 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 LEXMQ3ZCV2 418 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 OLFML1Q6UWY5 402 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 EMC1Q8N766 993 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 EFHBQ8N7U6 833 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 MAGOHBQ96A72 148 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 NCAPGQ9BPX3 1015 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 LPIN3Q9BQK8 851 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 SYT15Q9BQS2 421 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 PAAF1Q9BRP4 392 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 CNPY3Q9BT09 278 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 DUSP16Q9BY84 665 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 FUT8Q9BYC5 575 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 RAB17Q9H0T7 212 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 PCYOX1Q9UHG3 505 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 RASAL2Q9UJF2 1139 aa15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 UTP11Q9Y3A2 253 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-204ENST00000486319 C2CD4BA6NLJ0 364 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 M0QZQ0 153 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 LINC01565O15544 149 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 LRCH4O75427 683 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 CYP11A1P05108 521 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 RARAP10276 462 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 BMP1P13497 986 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 ACAT1P24752 427 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 PCK1P35558 622 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 FNTAP49354 379 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 NDUFV1P49821 464 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 CUL1Q13616 776 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 SIX1Q15475 284 aaPredicted RBP15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 ZFYVE27Q5T4F4 411 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 EMBQ6PCB8 327 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 FUKQ8N0W3 1084 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 ZBP1Q9H171 429 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 LRRC19Q9H756 370 aa15.27■□□□□ 0.04
POLR2J3-204ENST00000486319 C2orf71A6NGG8 1288 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 BHMG1C9JSJ3 638 aaPredicted RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 PIK3R2O00459 728 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 DLL1O00548 723 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 DPYSL4O14531 572 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 TTI1O43156 1089 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 ATP2C2O75185 946 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 KRT1P04264 644 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 MYBL2P10244 700 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 CTSAP10619 480 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 RALAP11233 206 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 PDGFRAP16234 1089 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 NPR3P17342 541 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 TKTP29401 623 aaKnown RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 LTBRP36941 435 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 DUSP6Q16828 381 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 MDH1BQ5I0G3 518 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 CCDC137Q6PK04 289 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms