RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 GATMP50440 423 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 MRPS35P82673 323 aaKnown RBP7.07□□□□□ -1.28
RTN4-214ENST00000486085 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.07□□□□□ -1.28
RTN4-214ENST00000486085 FAM83BQ5T0W9 1011 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 ZNF618Q5T7W0 954 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 TEDDM1Q5T9Z0 273 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 KIAA0895LQ68EN5 471 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 LAIR1Q6GTX8 287 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 PGBD2Q6P3X8 592 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 MZT2AQ6P582 158 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 USP17L6PQ6QN14 398 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 CAND1Q86VP6 1230 aaKnown RBP7.07□□□□□ -1.28
RTN4-214ENST00000486085 CYP2W1Q8TAV3 490 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 IPO4Q8TEX9 1081 aaKnown RBP7.07□□□□□ -1.28
RTN4-214ENST00000486085 XAGE5Q8WWM1 108 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 RFKQ969G6 155 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 FAM227BQ96M60 508 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 HIST1H2AAQ96QV6 131 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 ZBTB26Q9HCK0 441 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 PTPRHQ9HD43 1115 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 DNAJB11Q9UBS4 358 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 DIP2BQ9P265 1576 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 MTUS2Q5JR59 1369 aa7.07□□□□□ -1.28
RTN4-214ENST00000486085 NCOA2Q15596 1464 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 WDR27A2RRH5 827 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 AGPSO00116 658 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 ADRA1BP35368 520 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 PLA2G5P39877 138 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 MTHFSP49914 203 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 PDE1AP54750 535 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 ZXDAP98168 799 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 BMPR2Q13873 1038 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 RAB30Q15771 203 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 NBPF8Q3BBV2 869 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 HECTD2Q5U5R9 776 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 DBX2Q6ZNG2 339 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 Q6ZPA2 131 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 CCDC28AQ8IWP9 274 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 ACTRT2Q8TDY3 377 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 MORC4Q8TE76 937 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 ZNF668Q96K58 619 aaPredicted RBP7.06□□□□□ -1.28
RTN4-214ENST00000486085 PBKQ96KB5 322 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 TMOD4Q9NZQ9 345 aa7.06□□□□□ -1.28
RTN4-214ENST00000486085 DRG1Q9Y295 367 aaKnown RBP7.06□□□□□ -1.28
RTN4-214ENST00000486085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.06□□□□□ -1.28
RTN4-214ENST00000486085 MAP3K4Q9Y6R4 1608 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 RRBP1Q9P2E9 1410 aaKnown RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 TMEM191CA6NGB0 347 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 SNX2O60749 519 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 LMNAP02545 664 aaKnown RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 IL6RP08887 468 aaPredicted RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 PECAM1P16284 738 aaPredicted RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 EGR1P18146 543 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 FSTL1Q12841 308 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 ELF2Q15723 593 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 ARHGAP15Q53QZ3 475 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 MRNIPQ6NTE8 343 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 CLEC9AQ6UXN8 241 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 USP51Q70EK9 711 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 PEG10Q86TG7 708 aaKnown RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 SOCS4Q8WXH5 440 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 TTPALQ9BTX7 342 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 INO80BQ9C086 356 aaPredicted RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 CCNL1Q9UK58 526 aaPredicted RBP7.05□□□□□ -1.28
RTN4-214ENST00000486085 ITSN2Q9NZM3 1697 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
RTN4-214ENST00000486085 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
RTN4-214ENST00000486085 PLCH2O75038 1416 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 PIP5K1BO14986 540 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 CCNT2O60583 730 aaKnown RBP7.04□□□□□ -1.28
RTN4-214ENST00000486085 NXPH3O95157 252 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 KRT4P19013 534 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 TIRAPP58753 221 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 TIAL1Q01085 375 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTN4-214ENST00000486085 MAPKAPK3Q16644 382 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 GRAMD1BQ3KR37 738 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 TMTC4Q5T4D3 741 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 LRRC71Q8N4P6 559 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 ZNF384Q8TF68 577 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 VN1R3Q9BXE9 311 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 OBP2BQ9NPH6 170 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 NECTIN3Q9NQS3 549 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 ARHGEF3Q9NR81 526 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 IGSF9Q9P2J2 1179 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 VPS51Q9UID3 782 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 ST3GAL5Q9UNP4 418 aa7.04□□□□□ -1.28
RTN4-214ENST00000486085 GPATCH8Q9UKJ3 1502 aaKnown RBP7.04□□□□□ -1.28
RTN4-214ENST00000486085 KIAA1107Q9UPP5 1409 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 GOLGA6L3A6NEY3 463 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 PSMD9O00233 223 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 IFRD1O00458 451 aaPredicted RBP7.03□□□□□ -1.28
RTN4-214ENST00000486085 TCEA3O75764 348 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 ONECUT2O95948 504 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 GRIA3P42263 894 aa7.03□□□□□ -1.28
RTN4-214ENST00000486085 ICA1Q05084 483 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms