RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ADORA2BP29275 332 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 PSMC2P35998 433 aaKnown RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 MRPS21P82921 87 aaKnown RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 ENPEPQ07075 957 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 PPP3CAQ08209 521 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 INCA1Q0VD86 236 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 ADAM9Q13443 819 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 SF3A2Q15428 464 aaKnown RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 AASDHQ4L235 1098 aaPredicted RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 LY6G5CQ5SRR4 150 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 C12orf40Q86WS4 652 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 CCDC33Q8N5R6 958 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 C12orf50Q8NA57 414 aaPredicted RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 TAS1R2Q8TE23 839 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 CYP3A43Q9HB55 503 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 APOBEC3GQ9HC16 384 aaKnown RBP27.18■■□□□ 1.94
HLA-F-227ENST00000485513 PCDHGA5Q9Y5G8 931 aa27.18■■□□□ 1.94
HLA-F-227ENST00000485513 KAT7O95251 611 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 MESP2Q0VG99 397 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 ELF2Q15723 593 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 SFTPA1Q8IWL2 248 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 TWNKQ96RR1 684 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 HNRNPABQ99729 332 aaKnown RBP27.17■■□□□ 1.94
HLA-F-227ENST00000485513 NT5C1AQ9BXI3 368 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 NIF3L1Q9GZT8 377 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 DUSP15Q9H1R2 295 aaPredicted RBP27.17■■□□□ 1.94
HLA-F-227ENST00000485513 MMRN2Q9H8L6 949 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 ARHGEF4Q9NR80 690 aa27.17■■□□□ 1.94
HLA-F-227ENST00000485513 TLR8Q9NR97 1041 aaKnown RBP27.17■■□□□ 1.94
HLA-F-227ENST00000485513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.16■■□□□ 1.94
HLA-F-227ENST00000485513 DCLK1O15075 740 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 TLR5O60602 858 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 PGFP49763 221 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 GAD2Q05329 585 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 CCDC150Q8NCX0 1101 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 CYFIP2Q96F07 1278 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 CCDC34Q96HJ3 373 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 DUSP9Q99956 384 aaKnown RBP27.16■■□□□ 1.94
HLA-F-227ENST00000485513 GDPD2Q9HCC8 539 aa27.16■■□□□ 1.94
HLA-F-227ENST00000485513 RHOBTB1O94844 696 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 IRF1P10914 325 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 MPLP40238 635 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 GRIA2P42262 883 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 KDSRQ06136 332 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 CRY1Q16526 586 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 ZCWPW2Q504Y3 356 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 USP39Q53GS9 565 aaKnown RBP27.15■■□□□ 1.94
HLA-F-227ENST00000485513 PLA2G2CQ5R387 149 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 ANO7Q6IWH7 933 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 CLEC20AQ6ZU45 233 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 BBS7Q8IWZ6 715 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 JAKMIP2Q96AA8 810 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 TPSD1Q9BZJ3 242 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 TMEM8AQ9HCN3 771 aa27.15■■□□□ 1.94
HLA-F-227ENST00000485513 A0A0A0MRY4 1105 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 CD58P19256 250 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 TIE1P35590 1138 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 BTBD8Q5XKL5 378 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 GPRIN1Q7Z2K8 1008 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 RASSF3Q86WH2 238 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 ALLCQ8N6M5 410 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 WBP2Q969T9 261 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 CNOT6LQ96LI5 555 aaKnown RBP27.14■■□□□ 1.94
HLA-F-227ENST00000485513 DNAI2Q9GZS0 605 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 SPHK2Q9NRA0 654 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 SCML2Q9UQR0 700 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 INVSQ9Y283 1065 aa27.14■■□□□ 1.94
HLA-F-227ENST00000485513 HHLA1C9JL84 531 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 HOXC11O43248 304 aaPredicted RBP27.13■■□□□ 1.93
HLA-F-227ENST00000485513 CILPO75339 1184 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 KLF8O95600 359 aaPredicted RBP27.13■■□□□ 1.93
HLA-F-227ENST00000485513 GBP1P32455 592 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 GTF2H1P32780 548 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 TNFRSF4P43489 277 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 EDRF1Q3B7T1 1238 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 HSF5Q4G112 596 aaPredicted RBP27.13■■□□□ 1.93
HLA-F-227ENST00000485513 IL17RCQ8NAC3 791 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 TXNDC5Q8NBS9 432 aaKnown RBP27.13■■□□□ 1.93
HLA-F-227ENST00000485513 WHAMMQ8TF30 809 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 SMOC1Q9H4F8 434 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 PNPLA8Q9NP80 782 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 VPS45Q9NRW7 570 aa27.13■■□□□ 1.93
HLA-F-227ENST00000485513 CYP26A1O43174 497 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 TBX18O95935 607 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 CHRM1P11229 460 aaPredicted RBP27.12■■□□□ 1.93
HLA-F-227ENST00000485513 ACO1P21399 889 aaKnown RBP27.12■■□□□ 1.93
HLA-F-227ENST00000485513 KIR2DL1P43626 348 aaPredicted RBP27.12■■□□□ 1.93
HLA-F-227ENST00000485513 LIMK1P53667 647 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 PPM1JQ5JR12 505 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 EMC10Q5UCC4 262 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 KRT39Q6A163 491 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 TMEM92Q6UXU6 159 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 C11orf74Q86VG3 221 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 TTC30AQ86WT1 665 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 ETFBKMTQ8IXQ9 262 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 SMYD4Q8IYR2 804 aaPredicted RBP27.12■■□□□ 1.93
HLA-F-227ENST00000485513 ABCA7Q8IZY2 2146 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 PHTF2Q8N3S3 785 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 NAT16Q8N8M0 369 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 MDGA1Q8NFP4 955 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms