RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 STK4Q13043 487 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 PSMD6Q15008 389 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 STXBP5Q5T5C0 1151 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 FBXW10Q5XX13 1052 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 EIF1ADQ8N9N8 165 aaKnown RBP11.34□□□□□ -0.59
DDX56-212ENST00000485367 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 DHTKD1Q96HY7 919 aaPredicted RBP11.34□□□□□ -0.59
DDX56-212ENST00000485367 ACBD6Q9BR61 282 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 TRMT61BQ9BVS5 477 aaKnown RBP11.34□□□□□ -0.59
DDX56-212ENST00000485367 ATXN3LQ9H3M9 355 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 BRD9Q9H8M2 597 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
DDX56-212ENST00000485367 ZFHX2Q9C0A1 2572 aaPredicted RBP11.34□□□□□ -0.59
DDX56-212ENST00000485367 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 BICDL2A1A5D9 508 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 HCRTO43612 131 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 LCA5LO95447 670 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 FGF19O95750 216 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 TRIM21P19474 475 aaKnown RBP11.33□□□□□ -0.59
DDX56-212ENST00000485367 CD72P21854 359 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 GDI1P31150 447 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 RDXP35241 583 aaKnown RBP11.33□□□□□ -0.59
DDX56-212ENST00000485367 LHX1P48742 406 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.59
DDX56-212ENST00000485367 PSMD2Q13200 908 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 UBXN2BQ14CS0 331 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.59
DDX56-212ENST00000485367 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 ARHGAP15Q53QZ3 475 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.59
DDX56-212ENST00000485367 VITQ6UXI7 678 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 GAREM2Q75VX8 874 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 C12orf56Q8IXR9 622 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 IFT20Q8IY31 132 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 ARFGAP2Q8N6H7 521 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 MAGEC3Q8TD91 643 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 GCNAQ96QF7 691 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 CGRRF1Q99675 332 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 LACRTQ9GZZ8 138 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 GTF3C4Q9UKN8 822 aa11.33□□□□□ -0.59
DDX56-212ENST00000485367 KANSL1LA0AUZ9 987 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 HEPACAM2A8MVW5 462 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 HMGB1P1B2RPK0 211 aaPredicted RBP11.33□□□□□ -0.6
DDX56-212ENST00000485367 LRRN2O75325 713 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 PSMC3P17980 439 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 PCSK1P29120 753 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 GPR15P49685 360 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 ANGPT1Q15389 498 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 TTMPQ5BVD1 217 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 GPR158Q5T848 1215 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 CCDC181Q5TID7 509 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 SDHAF4Q5VUM1 108 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 TPRG1Q6ZUI0 275 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 GSPT2Q8IYD1 628 aaKnown RBP11.33□□□□□ -0.6
DDX56-212ENST00000485367 PJA1Q8NG27 643 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 CCDC42Q96M95 316 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 PLCD4Q9BRC7 762 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 LRRC1Q9BTT6 524 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 TRPV4Q9HBA0 871 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 HEBP1Q9NRV9 189 aa11.33□□□□□ -0.6
DDX56-212ENST00000485367 MTF2Q9Y483 593 aaPredicted RBP11.33□□□□□ -0.6
DDX56-212ENST00000485367 GOLGA6L7A0A1B0GV03 622 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 FAM170BA6NMN3 283 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 GABRDO14764 452 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 ZNF263O14978 683 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 ZNF185O15231 689 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 CST3P01034 146 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 CYP2F1P24903 491 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 CDC25CP30307 473 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 LSP1P33241 339 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 CYP4F8P98187 520 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 ACTN3Q08043 901 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 TRPC3Q13507 836 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 DDR2Q16832 855 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 SPATA2LQ8IUW3 424 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 ARID3BQ8IVW6 561 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 MFSD6LQ8IWD5 586 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 YAF2Q8IY57 180 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 IQCKQ8N0W5 287 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 RNF10Q8N5U6 811 aaKnown RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 DEPDC1BQ8WUY9 529 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 ZNF516Q92618 1163 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 P3H4Q92791 437 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 IRF7Q92985 503 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 CCDC47Q96A33 483 aaKnown RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 E2F7Q96AV8 911 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms