RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 GPD2P43304 727 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 POLR2FP61218 127 aaKnown RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 COL4A3Q01955 1670 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 TNK2Q07912 1038 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 MLF2Q15773 248 aaPredicted RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 MEA1Q16626 185 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 ARHGAP29Q52LW3 1261 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 SLC44A4Q53GD3 710 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 CWF19L1Q69YN2 538 aaKnown RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 PM20D1Q6GTS8 502 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 NDRG1Q92597 394 aaKnown RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 LRRC4Q9HBW1 653 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 TRPV5Q9NQA5 729 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 CYTH4Q9UIA0 394 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 NAGPAQ9UK23 515 aa14.28□□□□□ -0.12
SOX2-OT-209ENST00000485035 NUP210Q8TEM1 1887 aaPredicted RBP14.27□□□□□ -0.12
SOX2-OT-209ENST00000485035 SHISA7A6NL88 538 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 PIK3R2O00459 728 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 RARGP13631 454 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 LCP1P13796 627 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 JAM2P57087 298 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 PTK2Q05397 1052 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 MTF1Q14872 753 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 TRIM68Q6AZZ1 485 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 PASD1Q8IV76 773 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 SIX6OS1Q8N1H7 587 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 FBXL6Q8N531 539 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 HSFY1Q96LI6 401 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 PCMTD1Q96MG8 357 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 FAM83CQ9BQN1 747 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 NLRC4Q9NPP4 1024 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 HPS4Q9NQG7 708 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 GKN1Q9NS71 199 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 THG1LQ9NWX6 298 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 NCOR1O75376 2440 aa14.27□□□□□ -0.13
SOX2-OT-209ENST00000485035 TRIOO75962 3097 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 TECTAO75443 2155 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 A0A1B0GTH6 734 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 YJEFN3A6XGL0 299 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 E7ENQ6 273 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 MDM4O15151 490 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 ARSAP15289 507 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 CYP11B1P15538 503 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 RPL34P49207 117 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 PSEN1P49768 467 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 STARD6P59095 220 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 DAOAP59103 153 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 LRSAM1Q6UWE0 723 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 TPRG1Q6ZUI0 275 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 SCML4Q8N228 414 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 WDTC1Q8N5D0 677 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 FLCNQ8NFG4 579 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 NEK11Q8NG66 645 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 TTC8Q8TAM2 541 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 CLEC4CQ8WTT0 213 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 OSCP1Q8WVF1 389 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 WBP2Q969T9 261 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 TBC1D17Q9HA65 648 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 CNGB3Q9NQW8 809 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 GTSE1Q9NYZ3 720 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 CLIC5Q9NZA1 410 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 CFAP97Q9P2B7 532 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 DAAM1Q9Y4D1 1078 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 WNT6Q9Y6F9 365 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 PIAS3Q9Y6X2 628 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 COL4A2P08572 1712 aa14.26□□□□□ -0.13
SOX2-OT-209ENST00000485035 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 SCAMP3O14828 347 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 GFPT2O94808 682 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 SERPINC1P01008 464 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 CD72P21854 359 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 SOX5P35711 763 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 ATP5C1P36542 298 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 SOX9P48436 509 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 VCPP55072 806 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 BPIFB4P59827 614 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 TPM4P67936 248 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 PRKCQQ04759 706 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 PDCLQ13371 301 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 C10orf120Q5SQS8 335 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 CC2D1AQ6P1N0 951 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 KLHDC10Q6PID8 442 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 NOP9Q86U38 636 aaKnown RBP14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 ARHGAP18Q8N392 663 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 ZNF276Q8N554 614 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 CSGALNACT1Q8TDX6 532 aa14.25□□□□□ -0.13
SOX2-OT-209ENST00000485035 EPS8L1Q8TE68 723 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms