RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 MPLP40238 635 aa21.31■■□□□ 1
ACTB-212ENST00000484841 ASPAP45381 313 aa21.31■■□□□ 1
ACTB-212ENST00000484841 SLC6A11P48066 632 aa21.31■■□□□ 1
ACTB-212ENST00000484841 GCLMP48507 274 aa21.31■■□□□ 1
ACTB-212ENST00000484841 SF3A2Q15428 464 aaKnown RBP21.31■■□□□ 1
ACTB-212ENST00000484841 ANO4Q32M45 955 aa21.31■■□□□ 1
ACTB-212ENST00000484841 HSF5Q4G112 596 aaPredicted RBP21.31■■□□□ 1
ACTB-212ENST00000484841 ANO7Q6IWH7 933 aa21.31■■□□□ 1
ACTB-212ENST00000484841 GUF1Q8N442 669 aaKnown RBP21.31■■□□□ 1
ACTB-212ENST00000484841 JAKMIP2Q96AA8 810 aa21.31■■□□□ 1
ACTB-212ENST00000484841 CYFIP2Q96F07 1278 aa21.31■■□□□ 1
ACTB-212ENST00000484841 SMOQ99835 787 aa21.31■■□□□ 1
ACTB-212ENST00000484841 CSNK1G1Q9HCP0 422 aa21.31■■□□□ 1
ACTB-212ENST00000484841 POLMQ9NP87 494 aaPredicted RBP21.31■■□□□ 1
ACTB-212ENST00000484841 VPS45Q9NRW7 570 aa21.31■■□□□ 1
ACTB-212ENST00000484841 IL37Q9NZH6 218 aa21.31■■□□□ 1
ACTB-212ENST00000484841 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
ACTB-212ENST00000484841 MYOFQ9NZM1 2061 aa21.3■■□□□ 1
ACTB-212ENST00000484841 FRYLO94915 3013 aa21.3■■□□□ 1
ACTB-212ENST00000484841 DMXL1Q9Y485 3027 aa21.3■■□□□ 1
ACTB-212ENST00000484841 FAM237AA0A1B0GTK4 181 aa21.3■■□□□ 1
ACTB-212ENST00000484841 GDF9O60383 454 aa21.3■■□□□ 1
ACTB-212ENST00000484841 ZNF202O95125 648 aa21.3■■□□□ 1
ACTB-212ENST00000484841 TRIM49P0CI25 452 aa21.3■■□□□ 1
ACTB-212ENST00000484841 TRIM49CP0CI26 452 aa21.3■■□□□ 1
ACTB-212ENST00000484841 GRIA2P42262 883 aa21.3■■□□□ 1
ACTB-212ENST00000484841 CREB5Q02930 508 aa21.3■■□□□ 1
ACTB-212ENST00000484841 KDSRQ06136 332 aa21.3■■□□□ 1
ACTB-212ENST00000484841 ENPEPQ07075 957 aa21.3■■□□□ 1
ACTB-212ENST00000484841 CRY1Q16526 586 aa21.3■■□□□ 1
ACTB-212ENST00000484841 GAB4Q2WGN9 574 aa21.3■■□□□ 1
ACTB-212ENST00000484841 EOGTQ5NDL2 527 aa21.3■■□□□ 1
ACTB-212ENST00000484841 LY6G5CQ5SRR4 150 aa21.3■■□□□ 1
ACTB-212ENST00000484841 C12orf29Q8N999 325 aa21.3■■□□□ 1
ACTB-212ENST00000484841 CHAMP1Q96JM3 812 aa21.3■■□□□ 1
ACTB-212ENST00000484841 TPSD1Q9BZJ3 242 aa21.3■■□□□ 1
ACTB-212ENST00000484841 DUSP15Q9H1R2 295 aaPredicted RBP21.3■■□□□ 1
ACTB-212ENST00000484841 BCCIPQ9P287 314 aaKnown RBP eCLIP21.3■■□□□ 1
ACTB-212ENST00000484841 HMGXB4Q9UGU5 601 aa21.3■■□□□ 1
ACTB-212ENST00000484841 LSM7Q9UK45 103 aaKnown RBP21.3■■□□□ 1
ACTB-212ENST00000484841 CIZ1Q9ULV3 898 aaPredicted RBP21.3■■□□□ 1
ACTB-212ENST00000484841 DCHS1Q96JQ0 3298 aa21.3■■□□□ 1
ACTB-212ENST00000484841 FAM92AA1XBS5 289 aa21.29■■□□□ 1
ACTB-212ENST00000484841 TBC1D3BA6NDS4 549 aa21.29■■□□□ 1
ACTB-212ENST00000484841 GOLGA6L4A6NEF3 574 aa21.29■■□□□ 1
ACTB-212ENST00000484841 STX10O60499 249 aa21.29■■□□□ 1
ACTB-212ENST00000484841 TLR5O60602 858 aa21.29■■□□□ 1
ACTB-212ENST00000484841 BEST1O76090 585 aa21.29■■□□□ 1
ACTB-212ENST00000484841 KLF8O95600 359 aaPredicted RBP21.29■■□□□ 1
ACTB-212ENST00000484841 ZDHHC11BP0C7U3 371 aa21.29■■□□□ 1
ACTB-212ENST00000484841 CD58P19256 250 aa21.29■■□□□ 1
ACTB-212ENST00000484841 ATP5C1P36542 298 aaKnown RBP21.29■■□□□ 1
ACTB-212ENST00000484841 TNFRSF4P43489 277 aa21.29■■□□□ 1
ACTB-212ENST00000484841 PPM1JQ5JR12 505 aa21.29■■□□□ 1
ACTB-212ENST00000484841 TADA2BQ86TJ2 420 aa21.29■■□□□ 1
ACTB-212ENST00000484841 ALLCQ8N6M5 410 aa21.29■■□□□ 1
ACTB-212ENST00000484841 TXNDC5Q8NBS9 432 aaKnown RBP21.29■■□□□ 1
ACTB-212ENST00000484841 ZMIZ2Q8NF64 920 aa21.29■■□□□ 1
ACTB-212ENST00000484841 CNOT6LQ96LI5 555 aaKnown RBP21.29■■□□□ 1
ACTB-212ENST00000484841 HNRNPABQ99729 332 aaKnown RBP21.29■■□□□ 1
ACTB-212ENST00000484841 NIF3L1Q9GZT8 377 aa21.29■■□□□ 1
ACTB-212ENST00000484841 RMND1Q9NWS8 449 aa21.29■■□□□ 1
ACTB-212ENST00000484841 DEC1Q9P2X7 70 aa21.29■■□□□ 1
ACTB-212ENST00000484841 INVSQ9Y283 1065 aa21.29■■□□□ 1
ACTB-212ENST00000484841 DCLK1O15075 740 aa21.28■■□□□ 1
ACTB-212ENST00000484841 EPB41P11171 864 aaKnown RBP21.28■■□□□ 1
ACTB-212ENST00000484841 LIMK1P53667 647 aa21.28■■□□□ 1
ACTB-212ENST00000484841 INCA1Q0VD86 236 aa21.28■■□□□ 1
ACTB-212ENST00000484841 C1orf220Q5T0J3 134 aa21.28■■□□□ 1
ACTB-212ENST00000484841 KRT39Q6A163 491 aa21.28■■□□□ 1
ACTB-212ENST00000484841 TRMT11Q7Z4G4 463 aaKnown RBP21.28■■□□□ 1
ACTB-212ENST00000484841 BBS7Q8IWZ6 715 aa21.28■■□□□ 1
ACTB-212ENST00000484841 PGBD3Q8N328 593 aa21.28■■□□□ 1
ACTB-212ENST00000484841 TTC39CQ8N584 583 aa21.28■■□□□ 1
ACTB-212ENST00000484841 NAT16Q8N8M0 369 aa21.28■■□□□ 1
ACTB-212ENST00000484841 TAS1R2Q8TE23 839 aa21.28■■□□□ 1
ACTB-212ENST00000484841 ZFRQ96KR1 1074 aaKnown RBP21.28■■□□□ 1
ACTB-212ENST00000484841 TMEM8AQ9HCN3 771 aa21.28■■□□□ 1
ACTB-212ENST00000484841 SPHK2Q9NRA0 654 aa21.28■■□□□ 1
ACTB-212ENST00000484841 PCDHA5Q9Y5H7 936 aa21.28■■□□□ 1
ACTB-212ENST00000484841 THADAQ6YHU6 1953 aa21.27■■□□□ 1
ACTB-212ENST00000484841 CETN3O15182 167 aa21.27■■□□□ 1
ACTB-212ENST00000484841 ZBTB24O43167 697 aaPredicted RBP21.27■■□□□ 1
ACTB-212ENST00000484841 ACO1P21399 889 aaKnown RBP21.27■■□□□ 1
ACTB-212ENST00000484841 GTF2H1P32780 548 aa21.27■■□□□ 1
ACTB-212ENST00000484841 PPP3CAQ08209 521 aa21.27■■□□□ 1
ACTB-212ENST00000484841 CLEC20AQ6ZU45 233 aa21.27■■□□□ 1
ACTB-212ENST00000484841 RASSF3Q86WH2 238 aa21.27■■□□□ 1
ACTB-212ENST00000484841 C12orf40Q86WS4 652 aa21.27■■□□□ 1
ACTB-212ENST00000484841 WHAMMQ8TF30 809 aa21.27■■□□□ 1
ACTB-212ENST00000484841 SPACA7Q96KW9 195 aa21.27■■□□□ 1
ACTB-212ENST00000484841 XPO6Q96QU8 1125 aaKnown RBP21.27■■□□□ 1
ACTB-212ENST00000484841 DUSP9Q99956 384 aaKnown RBP21.27■■□□□ 1
ACTB-212ENST00000484841 SCML2Q9UQR0 700 aa21.27■■□□□ 1
ACTB-212ENST00000484841 A0A0A0MRY4 1105 aa21.26■□□□□ 0.99
ACTB-212ENST00000484841 HOXC11O43248 304 aaPredicted RBP21.26■□□□□ 0.99
ACTB-212ENST00000484841 MAP3K13O43283 966 aa21.26■□□□□ 0.99
ACTB-212ENST00000484841 CAVIN2O95810 425 aa21.26■□□□□ 0.99
ACTB-212ENST00000484841 BYSLQ13895 437 aaKnown RBP21.26■□□□□ 0.99
ACTB-212ENST00000484841 EDRF1Q3B7T1 1238 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms