RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 DRICH1Q6PGQ1 229 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MARVELD2Q8N4S9 558 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 STARD8Q92502 1023 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 HEMGNQ9BXL5 484 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 TBX20Q9UMR3 447 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 DYTNA2CJ06 578 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DNALI1O14645 258 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 FOXD2O60548 495 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 RBP3P10745 1247 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 KRT5P13647 590 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 PEX3P56589 373 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 XIAPP98170 497 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DMPKQ09013 629 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 EFTUD2Q15029 972 aaKnown RBP eCLIP12.02□□□□□ -0.493e-6■■■■□ 20.5
SEC61A1-205ENST00000483956 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SDR16C5Q8N3Y7 309 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 ZNF276Q8N554 614 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 HIPK4Q8NE63 616 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 CGREF1Q99674 301 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 OSBPL6Q9BZF3 934 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 RSL24D1Q9UHA3 163 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 MEI4A8MW99 385 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DLDP09622 509 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 YWHABP31946 246 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 ECE1P42892 770 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 PHKA2P46019 1235 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 NSFP46459 744 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 HSD17B4P51659 736 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 CYP24A1Q07973 514 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 AOC3Q16853 763 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DCAF6Q58WW2 860 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 HP1BP3Q5SSJ5 553 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 BORAQ6PGQ7 559 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 DCDC5Q6ZRR9 648 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SV2AQ7L0J3 742 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 CNBD2Q96M20 576 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 BTBD9Q96Q07 612 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 GPATCH1Q9BRR8 931 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 TSSK1BQ9BXA7 367 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC24A2Q9UI40 661 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
SEC61A1-205ENST00000483956 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 A0A1B0GTW7 788 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 DNAJA2O60884 412 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 SORBS2O94875 1100 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 CYP2C9P11712 490 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 KRT4P19013 534 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 PCNX4Q63HM2 1172 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 LMBRD2Q68DH5 695 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 KRT27Q7Z3Y8 459 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 VCPIP1Q96JH7 1222 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 MANSC1Q9H8J5 431 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 THEGQ9P2T0 379 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 FETUBQ9UGM5 382 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM237BA0A1B0GVD1 139 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 ARHGAP42A6NI28 874 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 K7EPI3 171 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 ITM2AO43736 263 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 LIASO43766 372 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 NPR1P16066 1061 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 TAS2R40P59535 323 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 APOFQ13790 326 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 MORF4L2Q15014 288 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 LIN9Q5TKA1 542 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 AMIGO2Q86SJ2 522 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 C4orf19Q8IY42 314 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 LZTR1Q8N653 840 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 CPA5Q8WXQ8 436 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 TMIGD2Q96BF3 282 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 PLK2Q9NYY3 685 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms