RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 XYLT1Q86Y38 959 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 PASD1Q8IV76 773 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 MREGQ8N565 214 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CMASQ8NFW8 434 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 IPO4Q8TEX9 1081 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 AENQ8WTP8 325 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 HDAC7Q8WUI4 952 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 KBTBD7Q8WVZ9 684 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 KRT35Q92764 455 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 WNT8BQ93098 351 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CAVIN3Q969G5 261 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 C18orf25Q96B23 403 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 RBM41Q96IZ5 413 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CPXM1Q96SM3 734 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 KRT12Q99456 494 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 MRPL45Q9BRJ2 306 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ERP44Q9BS26 406 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FTHL17Q9BXU8 183 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FRMD8P1Q9BZ68 369 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 RAB17Q9H0T7 212 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CXCL16Q9H2A7 254 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 SNX25Q9H3E2 840 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ACBD3Q9H3P7 528 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 AGO3Q9H9G7 860 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FAM114A2Q9NRY5 505 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 RGS18Q9NS28 235 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 TRMT13Q9NUP7 481 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 TMEM51Q9NW97 253 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ASNSD1Q9NWL6 643 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CLEC1BQ9P126 229 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 HESX1Q9UBX0 185 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 TUBGCP4Q9UGJ1 667 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 DSEQ9UL01 958 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 NOD1Q9Y239 953 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 DRG1Q9Y295 367 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 UTP11Q9Y3A2 253 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CITO14578 2027 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 RALGAPA2Q2PPJ7 1873 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TRIP12Q14669 1992 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TMEM110-MUSTN1A8MSY1 372 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 M0QYV0 167 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PITPNM1O00562 1244 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CYB561D2O14569 222 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SPTLC1O15269 473 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ATMINO43313 823 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RAD51CO43502 376 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PHF2O75151 1096 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RNF8O76064 485 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 HEXIM1O94992 359 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TJP3O95049 919 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PARNO95453 639 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ERBB2P04626 1255 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RARAP10276 462 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CKBP12277 381 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 NPR3P17342 541 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DESP17661 470 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SP100P23497 879 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CD52P31358 61 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RFC1P35251 1148 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PLA2G4AP47712 749 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RAP1GAPP47736 663 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DNA2P51530 1060 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 GUCY2FP51841 1108 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF143P52747 638 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SLC8A3P57103 927 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RNASE9P60153 205 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 RPL7AP62424 266 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DR1Q01658 176 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SLC6A3Q01959 620 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PLCB3Q01970 1234 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 GUCY2DQ02846 1103 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SOX4Q06945 474 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 BST2Q10589 180 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 GRIK3Q13003 919 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 KLF1Q13351 362 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PDCLQ13371 301 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 CASP8Q14790 479 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SIX1Q15475 284 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TAZQ16635 292 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 UPP1Q16831 310 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PTPN20Q4JDL3 420 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 BOLA3Q53S33 107 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF618Q5T7W0 954 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 DUPD1Q68J44 220 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 TRAF7Q6Q0C0 670 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 SCARA5Q6ZMJ2 495 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 AGMOQ6ZNB7 445 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ACOT1Q86TX2 421 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF598Q86UK7 904 aaKnown RBP5.68□□□□□ -1.5
COL17A1-206ENST00000483876 KLHL7Q8IXQ5 586 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 KRT222Q8N1A0 295 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PRELID2Q8N945 189 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 OR6B3Q8NGW1 331 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 ATL2Q8NHH9 583 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 PPP1R13LQ8WUF5 828 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 KCTD13Q8WZ19 329 aa5.68□□□□□ -1.5
COL17A1-206ENST00000483876 MAGOHBQ96A72 148 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms