RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 ZNF839A8K0R7 811 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 KINO60870 393 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 KERAO60938 352 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 DGAT1O75907 488 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 VIPP01282 170 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 LRG1P02750 347 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 BMP3P12645 472 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 BSGP35613 385 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 PTDSS1P48651 473 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 GSK3AP49840 483 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 OXCT1P55809 520 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 TAF7Q15545 349 aaPredicted RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 ZNF628Q5EBL2 1059 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 PRRT3Q5FWE3 981 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 CRB2Q5IJ48 1285 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 RAB41Q5JT25 222 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 MANEALQ5VSG8 457 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 ABLIM2Q6H8Q1 611 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SUSD1Q6UWL2 747 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 DCP2Q8IU60 420 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 IL17RDQ8NFM7 739 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 IPMKQ8NFU5 416 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 OR6J1Q8NGC5 347 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 CEP95Q96GE4 821 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SCARF2Q96GP6 870 aaPredicted RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 AK8Q96MA6 479 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 TRIM5Q9C035 493 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 LIN28AQ9H9Z2 209 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 XPNPEP3Q9NQH7 507 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 POLR3BQ9NW08 1133 aaPredicted RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 XPR1Q9UBH6 696 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SH3BGRL2Q9UJC5 107 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 ANAPC5Q9UJX4 755 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 RCE1Q9Y256 329 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 PNMA6EA0A0J9YXQ4 647 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SAC3D1A6NKF1 404 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 TMEM232C9JQI7 657 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 CCNDBP1O95273 360 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 OR2C1O95371 312 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SPARCP09486 303 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 PTPN2P17706 415 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 BMPR1AP36894 532 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 TNIP1Q15025 636 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 DGKDQ16760 1214 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 FAM71DQ8N9W8 422 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 CASKIN2Q8WXE0 1202 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 KIF1BPQ96EK5 621 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 CCDC43Q96MW1 224 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 ATP6V0BQ99437 205 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 MYOCQ99972 504 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 HTATIP2Q9BUP3 242 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 THUMPD3Q9BV44 507 aaKnown RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 BTBD2Q9BX70 525 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 TMEM140Q9NV12 185 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 FBXO34Q9NWN3 711 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 SUCLA2Q9P2R7 463 aaPredicted RBP7.81□□□□□ -1.16
RBM39-233ENST00000482563 MOSPD1Q9UJG1 213 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 MKL2Q9ULH7 1088 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 HPSEQ9Y251 543 aa7.81□□□□□ -1.16
RBM39-233ENST00000482563 ATRNL1Q5VV63 1379 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 EFCAB8A8MWE9 144 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 RRP9O43818 475 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 STAM2O75886 525 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 GGPS1O95749 300 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 TUBBP07437 444 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 GNAI3P08754 354 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 DLDP09622 509 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 SELLP14151 372 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 SNRPBP14678 240 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 GLB1P16278 677 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 HLA-DPA1P20036 260 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 ALDH1A3P47895 512 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 CDK7P50613 346 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 GNAI1P63096 354 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 IL13RA1P78552 427 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 MRPS5P82675 430 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 TRIM29Q14134 588 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 PABPC1LQ4VXU2 614 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 KRBOX4Q5JUW0 171 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 MPP7Q5T2T1 576 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 UBAP2Q5T6F2 1119 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 SYNE3Q6ZMZ3 975 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 USP51Q70EK9 711 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 ADGRF2Q8IZF7 708 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 ZNF606Q8WXB4 792 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 LINC01599Q8WXQ3 324 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 GRAMD1AQ96CP6 724 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 SIPA1Q96FS4 1042 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 PPP1R13BQ96KQ4 1090 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 FER1L6-AS2Q96M78 137 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 GCNAQ96QF7 691 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 AGAP2Q99490 1192 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 CITED2Q99967 270 aaPredicted RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 MAK16Q9BXY0 300 aaKnown RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 TAOK3Q9H2K8 898 aa7.8□□□□□ -1.16
RBM39-233ENST00000482563 MMADHCQ9H3L0 296 aaPredicted RBP7.8□□□□□ -1.16
RBM39-233ENST00000482563 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms