RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 BAG1Q99933 345 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 SLC4A5Q9BY07 1137 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 TRPM5Q9NZQ8 1165 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 ADAM22Q9P0K1 906 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 C2orf78A6NCI8 922 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 YJEFN3A6XGL0 299 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 E7ENQ6 273 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 FTLP02792 175 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 F11P03951 625 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 CDC25CP30307 473 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 GBP2P32456 591 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 KCNQ1P51787 676 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 DAOAP59103 153 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 TAF5Q15542 800 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 PRSS36Q5K4E3 855 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 GPR158Q5T848 1215 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 FAM102AQ5T9C2 384 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 PTCRAQ6ISU1 281 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 ACAD10Q6JQN1 1059 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 XYLT1Q86Y38 959 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 EDEM1Q92611 657 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 MRPS31Q92665 395 aaKnown RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF653Q96CK0 615 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 C18orf8Q96DM3 657 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 MCRS1Q96EZ8 462 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 MYRFLQ96LU7 910 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 UBXN6Q9BZV1 441 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 CCSER2Q9H7U1 834 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 WDR6Q9NNW5 1121 aaKnown RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 CNGB3Q9NQW8 809 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 TLR8Q9NR97 1041 aaKnown RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 METTL5Q9NRN9 209 aaKnown RBP13.89□□□□□ -0.19
HDAC1-208ENST00000482310 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 MYO1AQ9UBC5 1043 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 COG5Q9UP83 839 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 SCML2Q9UQR0 700 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 NCOR1O75376 2440 aa13.89□□□□□ -0.19
HDAC1-208ENST00000482310 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF197O14709 1029 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MDM4O15151 490 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 RTN2O75298 545 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MOSPD3O75425 235 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 FBXO21O94952 628 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 POU2F2P09086 479 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 BMP1P13497 986 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 IL9P15248 144 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MMP8P22894 467 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
HDAC1-208ENST00000482310 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 ARHGAP15Q53QZ3 475 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MON1BQ7L1V2 547 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 SCD5Q86SK9 330 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 NACA2Q9H009 215 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 SMG9Q9H0W8 520 aaKnown RBP13.88□□□□□ -0.19
HDAC1-208ENST00000482310 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
HDAC1-208ENST00000482310 MYOFQ9NZM1 2061 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 ZNF840PA6NDX5 716 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 FGF19O95750 216 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 LTFP02788 710 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 CALB1P05937 261 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 RARGP13631 454 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 CYLC1P35663 651 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-208ENST00000482310 EPHA5P54756 1037 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 SNX16P57768 344 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 PTP4A2Q12974 167 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 SLC18A3Q16572 532 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 OLFML1Q6UWY5 402 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 RSRC2Q7L4I2 434 aaKnown RBP13.87□□□□□ -0.19
HDAC1-208ENST00000482310 PHF13Q86YI8 300 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-208ENST00000482310 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 TMEM139Q8IV31 216 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 MCOLN2Q8IZK6 566 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 ARL14EPQ8N8R7 260 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-208ENST00000482310 LEMD2Q8NC56 503 aa13.87□□□□□ -0.19
HDAC1-208ENST00000482310 ACRBPQ8NEB7 543 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms