RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 CAPN8A6NHC0 703 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 SPTLC1O15269 473 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 KRT38O76015 456 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 STIP1P31948 543 aaKnown RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 BCAP31P51572 246 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 CASP5P51878 434 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 NEK2P51955 445 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 LBX2Q6XYB7 198 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 SLC38A10Q9HBR0 1119 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 KLHL42Q9P2K6 505 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 CHORDC1Q9UHD1 332 aaPredicted RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 E9PMD0 336 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 PDXKO00764 312 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 ZBTB5O15062 677 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 ITM2AO43736 263 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 PEX10O60683 326 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 DNAJA2O60884 412 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 TDP2O95551 362 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 NR3C1P04150 777 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 SERPINB6P35237 376 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 CASP4P49662 377 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 MYBPC1Q00872 1141 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 USP41Q3LFD5 358 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 GJC2Q5T442 439 aaPredicted RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 CGREF1Q99674 301 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 HEPHQ9BQS7 1158 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
CHD6-208ENST00000480022 HEMK1Q9Y5R4 338 aaPredicted RBP11.3□□□□□ -0.6
CHD6-208ENST00000480022 RSPH10B2B2RC85 870 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 OXSR1O95747 527 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 RSPH10BP0C881 870 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 RAG1P15918 1043 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PPARGP37231 505 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 PHKA2P46019 1235 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CDK9P50750 372 aaKnown RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 NUP107P57740 925 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CCNIQ14094 377 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 ACAP1Q15027 740 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 TBCCQ15814 346 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 ARHGAP44Q17R89 818 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 NEPROQ6NW34 567 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CAPN12Q6ZSI9 719 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PRPF39Q86UA1 669 aaKnown RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 KCNK4Q9NYG8 393 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 INPP5FQ9Y2H2 1132 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PNMA6FA0A0J9YX94 578 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CNMDO75829 334 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 IL1BP01584 269 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 OCM2P0CE71 109 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 SRGAP2BP0DMP2 458 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CA8P35219 290 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 TAF1CQ15572 869 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 IYDQ6PHW0 289 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 ZNF564Q8TBZ8 553 aaPredicted RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 PPP4R1Q8TF05 950 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 SLC20A1Q8WUM9 679 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 ALKBH8Q96BT7 664 aaKnown RBP11.29□□□□□ -0.6
CHD6-208ENST00000480022 DCUN1D1Q96GG9 259 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 BTBD6Q96KE9 485 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 TMEM260Q9NX78 707 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 MAD1L1Q9Y6D9 718 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 ZNF536O15090 1300 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 KDM3AQ9Y4C1 1321 aa11.29□□□□□ -0.6
CHD6-208ENST00000480022 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CCNT2O60583 730 aaKnown RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 FAM58BPP0C7Q3 252 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 FDX1P10109 184 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 VDRP11473 427 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms