RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 SIGLEC16A6NMB1 481 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 CCL16O15467 120 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 LINC01565O15544 149 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TBX10O75333 385 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TADA3O75528 432 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 DAB1O75553 588 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 LTFP02788 710 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 IGFBP4P22692 258 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TUBP50607 506 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TAF12Q16514 161 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 FAM102AQ5T9C2 384 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 Q7L0L9 218 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 ARHGEF26Q96DR7 871 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-218ENST00000479897 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 RCCD1A6NED2 376 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 E7ENQ6 273 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 PIK3R2O00459 728 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 F11P03951 625 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 PTPN2P17706 415 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 CDC25CP30307 473 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 ITIH3Q06033 890 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 TAF10Q12962 218 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 PABPC1LQ4VXU2 614 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 GPR149Q86SP6 731 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 TMEM150AQ86TG1 271 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 ABCC13Q9NSE7 274 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 GMIPQ9P107 970 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 LCMT1Q9UIC8 334 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
TRAPPC12-218ENST00000479897 CLUHO75153 1309 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 GOLGA8SH3BPF8 625 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 DPYSL4O14531 572 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 KRT86O43790 486 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 RHOP08100 348 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 KRT3P12035 628 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 FOSL2P15408 326 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 PFKLP17858 780 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 LTBRP36941 435 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 HFE2Q6ZVN8 426 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
TRAPPC12-218ENST00000479897 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms