RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SSC5DA1L4H1 1573 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 TMEM233B4DJY2 109 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 TCERG1O14776 1098 aaKnown RBP6.22□□□□□ -1.41
UPF3A-205ENST00000479712 INHBBP09529 407 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 MGAT1P26572 445 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 PPM1FP49593 454 aaPredicted RBP6.22□□□□□ -1.41
UPF3A-205ENST00000479712 TFF2Q03403 129 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 BLMHQ13867 455 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 PUM3Q15397 648 aaKnown RBP6.22□□□□□ -1.41
UPF3A-205ENST00000479712 CSRP2Q16527 193 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 DCAF12L1Q5VU92 463 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 MED25Q71SY5 747 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 RNF44Q7L0R7 432 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 ZNF527Q8NB42 609 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 OR56A3Q8NH54 315 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 CCT6BQ92526 530 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 GNRHR2Q96P88 292 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 LUZP4Q9P127 313 aa6.22□□□□□ -1.41
UPF3A-205ENST00000479712 KTN1Q86UP2 1357 aaKnown RBP6.21□□□□□ -1.41
UPF3A-205ENST00000479712 TPRP12270 2363 aaKnown RBP6.21□□□□□ -1.42
UPF3A-205ENST00000479712 DRGXA6NNA5 263 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CYSRT1A8MQ03 144 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 E9PLN8 166 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 FFAR2O15552 330 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 PLA2G6O60733 806 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 MFAP3LO75121 409 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 RASSF9O75901 435 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 KIF20AO95235 890 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 IL1R1P14778 569 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 PAX3P23760 479 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 MSX2P35548 267 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-205ENST00000479712 GRK6P43250 576 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 AMPHP49418 695 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 PRKG1Q13976 671 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF124Q15973 351 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 AMOTQ4VCS5 1084 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CCDC38Q502W7 563 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 DRICH1Q6PGQ1 229 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CPXCR1Q8N123 301 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 SDR16C5Q8N3Y7 309 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 SYT8Q8NBV8 401 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 PDPRQ8NCN5 879 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 FAM46DQ8NEK8 389 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 MDGA1Q8NFP4 955 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 OR52N2Q8NGI0 321 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 IPCEF1Q8WWN9 437 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-205ENST00000479712 EVI5LQ96CN4 794 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 VKORC1Q9BQB6 163 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CNPPD1Q9BV87 410 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 STK33Q9BYT3 514 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CHST8Q9H2A9 424 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 XPR1Q9UBH6 696 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 HECAQ9UBI9 543 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF212Q9UDV6 495 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 SH3BP1Q9Y3L3 701 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 DCHS1Q96JQ0 3298 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 CDHR2Q9BYE9 1310 aa6.21□□□□□ -1.42
UPF3A-205ENST00000479712 KIF24Q5T7B8 1368 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 RIC1Q4ADV7 1423 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 CLCA1A8K7I4 914 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 SGPL1O95470 568 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 TFRCP02786 760 aaKnown RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 C8AP07357 584 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 TXNP10599 105 aaKnown RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 HK1P19367 917 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 ALDH9A1P49189 494 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 CHN2P52757 468 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 PTTG1IPP53801 180 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 FKBP1BP68106 108 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 NOMO2Q5JPE7 1267 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 METTL24Q5JXM2 366 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 RRAGBQ5VZM2 374 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 FAM160B1Q5W0V3 765 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 TLDC1Q6P9B6 456 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 CATSPERGQ6ZRH7 1159 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 DNAJC10Q8IXB1 793 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 SMAP1Q8IYB5 467 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 D2HGDHQ8N465 521 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 MYCT1Q8N699 235 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 SPATA5Q8NB90 893 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 DNERQ8NFT8 737 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 MUL1Q969V5 352 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 SPSB4Q96A44 273 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 LRRC46Q96FV0 321 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 SPATA5L1Q9BVQ7 753 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 TLR10Q9BXR5 811 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 EIF2AQ9BY44 585 aaKnown RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 MS4A7Q9GZW8 240 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-205ENST00000479712 TBC1D23Q9NUY8 699 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 MAN2B2Q9Y2E5 1009 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 ZBTB1Q9Y2K1 713 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF318Q5VUA4 2279 aa6.2□□□□□ -1.42
UPF3A-205ENST00000479712 ANKRD11Q6UB99 2663 aaPredicted RBP6.19□□□□□ -1.42
UPF3A-205ENST00000479712 SKAP2O75563 359 aaPredicted RBP6.19□□□□□ -1.42
UPF3A-205ENST00000479712 PRSS23O95084 383 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms