RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 GAD2Q05329 585 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 GOLGA8FQ08AF8 430 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 GOLGA8DPQ0D2H9 430 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 SPOPLQ6IQ16 392 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 KLHDC10Q6PID8 442 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 RHBDF2Q6PJF5 856 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 PRR23CQ6ZRP0 262 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 ELOA2Q8IYF1 753 aaPredicted RBP11.47□□□□□ -0.57
VANGL1-206ENST00000478369 C12orf29Q8N999 325 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 TAS1R2Q8TE23 839 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 CYFIP2Q96F07 1278 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 NACA2Q9H009 215 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 CCSER2Q9H7U1 834 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 APOBEC3GQ9HC16 384 aaKnown RBP11.47□□□□□ -0.57
VANGL1-206ENST00000478369 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 CHMP5Q9NZZ3 219 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 GMIPQ9P107 970 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 HMGXB4Q9UGU5 601 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 MMP17Q9ULZ9 603 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 MAPK8IP1Q9UQF2 711 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 SCML2Q9UQR0 700 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
VANGL1-206ENST00000478369 SLC30A4O14863 429 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TLR5O60602 858 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 BEST1O76090 585 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 RHOBTB1O94844 696 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 SMC2O95347 1197 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 ZNF806P0C7X5 589 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TRIM49P0CI25 452 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TRIM49CP0CI26 452 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
VANGL1-206ENST00000478369 ATP5C1P36542 298 aaKnown RBP11.46□□□□□ -0.57
VANGL1-206ENST00000478369 GRIA2P42262 883 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.57
VANGL1-206ENST00000478369 PSEN1P49768 467 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 DGKEP52429 567 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 LIMK1P53667 647 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 PNOCQ13519 176 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 ELF2Q15723 593 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 CLEC20AQ6ZU45 233 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 HTR3DQ70Z44 454 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 ZNF276Q8N554 614 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 FBXL13Q8NEE6 735 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TSTD1Q8NFU3 115 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 SPATA20Q8TB22 786 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 TSG101Q99816 390 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 FAM49BQ9NUQ9 324 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 RAB20Q9NX57 234 aa11.46□□□□□ -0.57
VANGL1-206ENST00000478369 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.46□□□□□ -0.57
VANGL1-206ENST00000478369 KIAA1549LQ6ZVL6 1849 aa11.46□□□□□ -0.58
VANGL1-206ENST00000478369 HHLA1C9JL84 531 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 KAT7O95251 611 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ACO1P21399 889 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ADORA2BP29275 332 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 HOXC13P31276 330 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 MXI1P50539 228 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 FKBP3Q00688 224 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ORC1Q13415 861 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 CRY1Q16526 586 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 PLK5Q496M5 336 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 USP39Q53GS9 565 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 C2orf27AQ580R0 203 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 LY6G5CQ5SRR4 150 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ZNF658Q5TYW1 1059 aaPredicted RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 KBTBD6Q86V97 674 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 RASSF3Q86WH2 238 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 DDX1Q92499 740 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 TWNKQ96RR1 684 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 CDK5RAP1Q96SZ6 601 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 DUSP16Q9BY84 665 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 ARHGEF4Q9NR80 690 aa11.45□□□□□ -0.58
VANGL1-206ENST00000478369 LSM7Q9UK45 103 aaKnown RBP11.45□□□□□ -0.58
VANGL1-206ENST00000478369 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.44□□□□□ -0.58
VANGL1-206ENST00000478369 MED19A0JLT2 244 aaPredicted RBP11.44□□□□□ -0.58
VANGL1-206ENST00000478369 CD58P19256 250 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 PPP1R2P41236 205 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 PRCPP42785 496 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 KIR2DL1P43626 348 aaPredicted RBP11.44□□□□□ -0.58
VANGL1-206ENST00000478369 SLC6A11P48066 632 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 KIF11P52732 1056 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 SEC13P55735 322 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 SLC8A3P57103 927 aa11.44□□□□□ -0.58
VANGL1-206ENST00000478369 LRRC63Q05C16 580 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms