RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TRPA1O75762 1119 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 MCF2P10911 925 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 KCNJ2P63252 427 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 OCRLQ01968 901 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 DPYSL3Q14195 570 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RGS9BPQ6ZS82 235 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ASB7Q9H672 318 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SLC12A6Q9UHW9 1150 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 hCG_1818297A0A087WSY0 165 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 VNN1O95497 513 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 POMCP01189 267 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SKIP12755 728 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 PTGIRP43119 386 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 USP10Q14694 798 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RABGAP1LQ5R372 815 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ZDHHC24Q6UX98 284 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 FAM183BPQ6ZVS7 135 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 MON1BQ7L1V2 547 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 DEFB106AQ8N104 65 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 USP6NLQ92738 828 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 GPR20Q99678 358 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 NTPCRQ9BSD7 190 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 CYP3A43Q9HB55 503 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TJP1Q07157 1748 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 MAP3K7O43318 606 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 JCHAINP01591 159 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 CDC25CP30307 473 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SOX11P35716 441 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TPD52P55327 224 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RTP1P59025 263 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RPL10AP62906 217 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 PDK1Q15118 436 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SV2CQ496J9 727 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TTC39BQ5VTQ0 682 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 PLEKHH3Q7Z736 793 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 NDRG1Q92597 394 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 VPS39Q96JC1 886 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 OSBPL1AQ9BXW6 950 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 UBXN6Q9BZV1 441 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ATXN3LQ9H3M9 355 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SARS2Q9NP81 518 aaKnown RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 RRN3P2A6NIE6 340 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SMIM24O75264 130 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 DGKIO75912 1065 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 APOC2P02655 101 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 CPB1P15086 417 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TKTL1P51854 596 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 BCAT1P54687 386 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 PRAMEP78395 509 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 CUL3Q13618 768 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ITIH4Q14624 930 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 SLC26A11Q86WA9 606 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 LMO3Q8TAP4 145 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TUBB6Q9BUF5 446 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 TASP1Q9H6P5 420 aa11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ABI2Q9NYB9 513 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-204ENST00000477421 ITGB4P16144 1822 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 LRCH4O75427 683 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 POLBP06746 335 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 THPOP40225 353 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PLEKHA7Q6IQ23 1121 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PRPF39Q86UA1 669 aaKnown RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 GLIS1Q8NBF1 620 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PIK3R5Q8WYR1 880 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 BHMTQ93088 406 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ATP6V1E2Q96A05 226 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 YIPF3Q9GZM5 350 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 WDCPQ9H6R7 721 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 LRRC4CQ9HCJ2 640 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PTPRJQ12913 1337 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MYH11P35749 1972 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 UNCXA6NJT0 531 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 CCDC22O60826 627 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ERBB2P04626 1255 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 UNGP13051 313 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ARL2P36404 184 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 AVPR1AP37288 418 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ETFBP38117 255 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MMP13P45452 471 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms